RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 SFI1A8K8P3 1242 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 CLDN3O15551 220 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ZBTB24O43167 697 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 HIP1RO75146 1068 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 TULP3O75386 442 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ADH1CP00326 375 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 RPA1P27694 616 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 HNF1BP35680 557 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 RPL10AP62906 217 aaKnown RBP13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 STK3Q13188 491 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 DNAJC3Q13217 504 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 TOB2Q14106 344 aaPredicted RBP13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 HES3Q5TGS1 186 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 LAYNQ6UX15 382 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 CHPFQ8IZ52 775 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 MED8Q96G25 268 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ZFRQ96KR1 1074 aaKnown RBP13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 DRC1Q96MC2 740 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 LGMNQ99538 433 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 CFAP97Q9P2B7 532 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 FTSJ1Q9UET6 329 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 DSEQ9UL01 958 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 SNX14Q9Y5W7 946 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 CPQQ9Y646 472 aa13.18□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 MYLKQ15746 1914 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 METTL12A8MUP2 240 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 WASH3PC4AMC7 463 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 MATR3P43243 847 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 MAPK7Q13164 816 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 TBC1D25Q3MII6 688 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 KCNT1Q5JUK3 1230 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 FSIP1Q8NA03 581 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 TERB1Q8NA31 727 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 EPS8L1Q8TE68 723 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 KCNB2Q92953 911 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 NFE2L3Q9Y4A8 694 aa13.17□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 H0Y8X5 98 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 XPOTO43592 962 aaKnown RBP13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 FAM189A1O60320 539 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ADRB2P07550 413 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ACAT1P24752 427 aaKnown RBP13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ACTN2P35609 894 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 TMPRSS3P57727 454 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 SLC7A9P82251 487 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 VAC14Q08AM6 782 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 CADM4Q8NFZ8 388 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 GABRG3Q99928 467 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 DEC1Q9P2X7 70 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 GTF3C4Q9UKN8 822 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 STARD13Q9Y3M8 1113 aa13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 RBM19Q9Y4C8 960 aaKnown RBP13.16□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PRRT4C9JH25 899 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ENC1O14682 589 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 SLC9A3R1O14745 358 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 HCRTO43612 131 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 GRIK1P39086 918 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 TSPY1Q01534 308 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 GAD2Q05329 585 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 STRN3Q13033 797 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PDIA5Q14554 519 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 NFE2Q16621 373 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 KIAA1614Q5VZ46 1190 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 FBXL19Q6PCT2 694 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 GATAD2AQ86YP4 633 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 KCTD17Q8N5Z5 321 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PRR7Q8TB68 274 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PKMYT1Q99640 499 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 RUSC1Q9BVN2 902 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ITM2CQ9NQX7 267 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 USP36Q9P275 1121 aaKnown RBP13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 ANKRD6Q9Y2G4 727 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 LRRK2Q5S007 2527 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 RELNP78509 3460 aa13.15□□□□□ -0.3
SMAD9-IT1-201ENST00000437983 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 BHMG1C9JSJ3 638 aaPredicted RBP13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TERTO14746 1132 aaKnown RBP13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 RFPL3O75679 317 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 PAX3P23760 479 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 KRT2P35908 639 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TAF6P49848 677 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 CCT8P50990 548 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 NFKB2Q00653 900 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ZPBP2Q6X784 338 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TMEM25Q86YD3 366 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 LEO1Q8WVC0 666 aaPredicted RBP13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMAD9-IT1-201ENST00000437983 TRIM9Q9C026 710 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms