RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TMOD1P28289 359 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 PCK1P35558 622 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 SCNN1AP37088 669 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ADCY8P40145 1251 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 TNFSF9P41273 254 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 MBTD1Q05BQ5 628 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 MOGSQ13724 837 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF667Q5HYK9 610 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 IZUMO3Q5VZ72 239 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 LMBRD2Q68DH5 695 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 DCUN1D2Q6PH85 259 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 PPP1R21Q6ZMI0 780 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ARHGEF18Q6ZSZ5 1173 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 USP50Q70EL3 339 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ARCQ7LC44 396 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 TRMT1LQ7Z2T5 733 aaKnown RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 APBB1IPQ7Z5R6 666 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CPLX4Q7Z7G2 160 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 EXOC3L1Q86VI1 746 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF410Q86VK4 478 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CCDC50Q8IVM0 306 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 WDTC1Q8N5D0 677 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CMASQ8NFW8 434 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CXorf38Q8TB03 319 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CCT6BQ92526 530 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ARHGEF2Q92974 986 aaKnown RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 MCRS1Q96EZ8 462 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CABS1Q96KC9 395 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 MMP19Q99542 508 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 HERPUD2Q9BSE4 406 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 TCHPQ9BT92 498 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CDT1Q9H211 546 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 PPANQ9NQ55 473 aaKnown RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 NINJ2Q9NZG7 142 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 SLC24A2Q9UI40 661 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ITGA11Q9UKX5 1188 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 NOD1Q9Y239 953 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 R3HDM2Q9Y2K5 976 aaKnown RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 PTPN22Q9Y2R2 807 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 C3orf70A6NLC5 250 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 FAM155AB1AL88 458 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 E7ESA3 106 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 ALOX15BO15296 676 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 PRPF4O43172 522 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 STRNO43815 780 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 HYAL3O43820 417 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 CILPO75339 1184 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 TRPA1O75762 1119 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF189O75820 626 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 DNAJC8O75937 253 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 OAS1P00973 400 aaKnown RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 GH1P01241 217 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 KRT1P04264 644 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SELPP16109 830 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SNX16P57768 344 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 CCNA1P78396 465 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 LACTBP83111 547 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SLC25A11Q02978 314 aaKnown RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 PTPN11Q06124 597 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 XRCC4Q13426 336 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 ACVR2BQ13705 512 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 LY6KQ17RY6 165 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 HSDL1Q3SXM5 330 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SPDYAQ5MJ70 313 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 LDLRAD1Q5T700 205 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 PRAMEF18Q5VWM3 479 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 TTC19Q6DKK2 380 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 VSTM1Q6UX27 236 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 C4orf22Q6V702 233 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 GADL1Q6ZQY3 521 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SLC4A11Q8NBS3 891 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 PPTC7Q8NI37 304 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 EPS8L3Q8TE67 593 aaKnown RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 STK32AQ8WU08 396 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 CKAP2Q8WWK9 683 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 ATG4AQ8WYN0 398 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 LENG1Q96BZ8 264 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 CCDC114Q96M63 670 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SPATA33Q96N06 139 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 MCEEQ96PE7 176 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 PLEKHA5Q9HAU0 1116 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 PRDM16Q9HAZ2 1276 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF358Q9NW07 568 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 RNF186Q9NXI6 227 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SAMD15Q9P1V8 674 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 RBPJLQ9UBG7 517 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 CHORDC1Q9UHD1 332 aaPredicted RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 SIX4Q9UIU6 781 aa7.79□□□□□ -1.16
COL17A1-204ENST00000433822 TPX2Q9ULW0 747 aaKnown RBP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.79□□□□□ -1.16
COL17A1-204ENST00000433822 CITO14578 2027 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 A0A0A0MRY4 1105 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 TLDC2A0PJX2 215 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 SERTM1A2A2V5 107 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 CFAP69A5D8W1 941 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 CFAP73A6NFT4 308 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 INO80B-WBP1J3KQ70 363 aa7.78□□□□□ -1.16
COL17A1-204ENST00000433822 APOC4-APOC2K7ER74 178 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms