RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 RNF139Q8WU17 664 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 SLC35F5Q8WV83 523 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 KCTD13Q8WZ19 329 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 EDAQ92838 391 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 USP13Q92995 863 aaPredicted RBP16.31■□□□□ 0.2
TREX1-201ENST00000433541 FAM149B1Q96BN6 582 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 XPO4Q9C0E2 1151 aaKnown RBP16.31■□□□□ 0.2
TREX1-201ENST00000433541 MFSD1Q9H3U5 465 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 TRPV4Q9HBA0 871 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 IL37Q9NZH6 218 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 NUDT5Q9UKK9 219 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 CCL26Q9Y258 94 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 CPQQ9Y646 472 aa16.31■□□□□ 0.2
TREX1-201ENST00000433541 FAM92AA1XBS5 289 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 COCHO43405 550 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 OAS1P00973 400 aaKnown RBP16.3■□□□□ 0.2
TREX1-201ENST00000433541 ATP5C1P36542 298 aaKnown RBP16.3■□□□□ 0.2
TREX1-201ENST00000433541 GPD2P43304 727 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 TUBP50607 506 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 JAM2P57087 298 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 SNX16P57768 344 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 PFKPQ01813 784 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 GOLGA8FQ08AF8 430 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 GOLGA8DPQ0D2H9 430 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 MEA1Q16626 185 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 SMYD5Q6GMV2 418 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 MFSD6LQ8IWD5 586 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 MSANTD4Q8NCY6 345 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 C1orf131Q8NDD1 294 aaKnown RBP16.3■□□□□ 0.2
TREX1-201ENST00000433541 CSGALNACT1Q8TDX6 532 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 EPS8L1Q8TE68 723 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 SH3RF2Q8TEC5 729 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 NDRG1Q92597 394 aaKnown RBP16.3■□□□□ 0.2
TREX1-201ENST00000433541 HSFY1Q96LI6 401 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 CDK5RAP1Q96SZ6 601 aaKnown RBP16.3■□□□□ 0.2
TREX1-201ENST00000433541 NMUR1Q9HB89 426 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 CNGB3Q9NQW8 809 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 OBP2AQ9NY56 170 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 RASAL2Q9UJF2 1139 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 CA14Q9ULX7 337 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 PCDHGC3Q9UN70 934 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 USP3Q9Y6I4 520 aa16.3■□□□□ 0.2
TREX1-201ENST00000433541 E5RJQ4 531 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 PI4K2BG5E9Z4 385 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 FBXO21O94952 628 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 MMEP08473 750 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 FERP16591 822 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 WEE1P30291 646 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 SIGLEC14Q08ET2 396 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 PDCLQ13371 301 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 ASIC2Q16515 512 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 ARHGAP29Q52LW3 1261 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 NOP9Q86U38 636 aaKnown RBP16.29■□□□□ 0.2
TREX1-201ENST00000433541 DDX42Q86XP3 938 aaKnown RBP eCLIP16.29■□□□□ 0.2
TREX1-201ENST00000433541 MIB1Q86YT6 1006 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
TREX1-201ENST00000433541 CPLX3Q8WVH0 158 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 IRF7Q92985 503 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 RSPRY1Q96DX4 576 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 ZFYVE19Q96K21 471 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 PPP1R13BQ96KQ4 1090 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 NUP58Q9BVL2 599 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 RNF38Q9H0F5 515 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 EPHX3Q9H6B9 360 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 ARHGAP26Q9UNA1 814 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 SH3BP1Q9Y3L3 701 aa16.29■□□□□ 0.2
TREX1-201ENST00000433541 FAM86C2PA6NEL3 165 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 LRRC53A6NM62 1247 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 LEFTY2O00292 366 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 SART1O43290 800 aaKnown RBP16.28■□□□□ 0.2
TREX1-201ENST00000433541 TBX18O95935 607 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 ZDHHC11BP0C7U3 371 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 IFNAR2P48551 515 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 PGFP49763 221 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 DAOAP59103 153 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 EFEMP1Q12805 493 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
TREX1-201ENST00000433541 MTF1Q14872 753 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 SFMBT2Q5VUG0 894 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 SNX30Q5VWJ9 437 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 TRIM67Q6ZTA4 783 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 ZNF677Q86XU0 584 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 SCUBE3Q8IX30 993 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 CLEC4CQ8WTT0 213 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 STK32AQ8WU08 396 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 SLC20A1Q8WUM9 679 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 EDEM1Q92611 657 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 TRIM5Q9C035 493 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 LHX5Q9H2C1 402 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.28■□□□□ 0.2
TREX1-201ENST00000433541 OSER1Q9NX31 292 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 CFAP97Q9P2B7 532 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 DNMT3LQ9UJW3 386 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 STRIP2Q9ULQ0 834 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 TRIOO75962 3097 aa16.28■□□□□ 0.2
TREX1-201ENST00000433541 YJEFN3A6XGL0 299 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 E7ENQ6 273 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 CAPN9O14815 690 aa16.27■□□□□ 0.2
TREX1-201ENST00000433541 SCAMP3O14828 347 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms