RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.1■□□□□ 0.65
HMGN1-206ENST00000431390 SSX2IPQ9Y2D8 614 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 USP3Q9Y6I4 520 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 BRWD1Q9NSI6 2320 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PLXNA4Q9HCM2 1894 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 TNFRSF10BO14763 440 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PSTPIP1O43586 416 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PDGFRAP16234 1089 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 DESP17661 470 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 FLT3P36888 993 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 NDUFV1P49821 464 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PEX5P50542 639 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 DNA2P51530 1060 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 DAOAP59103 153 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 RNASE9P60153 205 aaKnown RBP19.1■□□□□ 0.65
HMGN1-206ENST00000431390 TAF5Q15542 800 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PM20D1Q6GTS8 502 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 RNF19BQ6ZMZ0 732 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 RHOT1Q8IXI2 618 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 COG1Q8WTW3 980 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 PSMB7Q99436 277 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 NCAPGQ9BPX3 1015 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 CLSTN3Q9BQT9 956 aa19.1■□□□□ 0.65
HMGN1-206ENST00000431390 MRPL17Q9NRX2 175 aaKnown RBP19.1■□□□□ 0.65
HMGN1-206ENST00000431390 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.1■□□□□ 0.65
HMGN1-206ENST00000431390 WDR27A2RRH5 827 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 C2CD2LO14523 706 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 DAB1O75553 588 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 GRAP2O75791 330 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 ZBED1O96006 694 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 HAPLN1P10915 354 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-206ENST00000431390 CXCR5P32302 372 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 OR1D2P34982 312 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 BMPR1AP36894 532 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 PTPN9P43378 593 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 CKAP4Q07065 602 aaKnown RBP19.09■□□□□ 0.65
HMGN1-206ENST00000431390 LRRC38Q5VT99 294 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 TPGS2Q68CL5 300 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 TRNP1Q6NT89 227 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 CC2D1AQ6P1N0 951 aaPredicted RBP19.09■□□□□ 0.65
HMGN1-206ENST00000431390 CREG2Q8IUH2 290 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 SCN4BQ8IWT1 228 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 CEP112Q8N8E3 955 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 KLHL23Q8NBE8 558 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 ATAD1Q8NBU5 361 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 KRT35Q92764 455 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 PLVAPQ9BX97 442 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 ZBP1Q9H171 429 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 FNIP2Q9P278 1114 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 HSFX1Q9UBD0 423 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 LZTS1Q9Y250 596 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 USTQ9Y2C2 406 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 HCN4Q9Y3Q4 1203 aa19.09■□□□□ 0.65
HMGN1-206ENST00000431390 ZNF185O15231 689 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 ADAM12O43184 909 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 RNF8O76064 485 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 SLU7O95391 586 aaKnown RBP19.08■□□□□ 0.65
HMGN1-206ENST00000431390 VNN2O95498 520 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 CTSAP10619 480 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 HOXD11P31277 338 aaPredicted RBP19.08■□□□□ 0.65
HMGN1-206ENST00000431390 SDC4P31431 198 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 SLC5A3P53794 718 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 RWDD2BP57060 319 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 YWHAZP63104 245 aaKnown RBP19.08■□□□□ 0.65
HMGN1-206ENST00000431390 TMEM31Q5JXX7 168 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 ALG3Q92685 438 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 CEP295NLQ96MC4 621 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 DDX23Q9BUQ8 820 aaKnown RBP19.08■□□□□ 0.65
HMGN1-206ENST00000431390 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.08■□□□□ 0.65
HMGN1-206ENST00000431390 AFF4Q9UHB7 1163 aaKnown RBP19.08■□□□□ 0.65
HMGN1-206ENST00000431390 MTUS1Q9ULD2 1270 aa19.08■□□□□ 0.65
HMGN1-206ENST00000431390 PLXNA3P51805 1871 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 MYO16Q9Y6X6 1858 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 LINC01553A4QN01 128 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 LILRB3O75022 631 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 LRCH4O75427 683 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 ABLIM3O94929 683 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 USP17L7P0C7H9 530 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 RPL17P18621 184 aaKnown RBP19.07■□□□□ 0.64
HMGN1-206ENST00000431390 CTNNB1P35222 781 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 PCK1P35558 622 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 MATKP42679 507 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 TAS2R40P59535 323 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 RPL10AP62906 217 aaKnown RBP19.07■□□□□ 0.64
HMGN1-206ENST00000431390 CCDC14Q49A88 953 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 POLNQ7Z5Q5 900 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 NUP93Q8N1F7 819 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 ZNF461Q8TAF7 563 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 FAM149B1Q96BN6 582 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 CAPZA3Q96KX2 299 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 SPATA17Q96L03 361 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 SLC2A13Q96QE2 648 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 TRIM62Q9BVG3 475 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 POPDC2Q9HBU9 364 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 RXFP1Q9HBX9 757 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 GREB1Q4ZG55 1949 aa19.07■□□□□ 0.64
HMGN1-206ENST00000431390 NOS2P35228 1153 aa19.06■□□□□ 0.64
HMGN1-206ENST00000431390 PAFAH1B1P43034 410 aa19.06■□□□□ 0.64
HMGN1-206ENST00000431390 MARCKSL1P49006 195 aa19.06■□□□□ 0.64
HMGN1-206ENST00000431390 RAB33AQ14088 237 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms