RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 P4HA2O15460 535 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 OLFM2O95897 454 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 PRKCSHP14314 528 aaPredicted RBP17.92■□□□□ 0.46
UBE3D-204ENST00000430071 CD58P19256 250 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 YWHAQP27348 245 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 CXCL12P48061 93 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 SLC5A3P53794 718 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 MAP3K7CLP57077 242 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 SRSF5Q13243 272 aaKnown RBP17.92■□□□□ 0.46
UBE3D-204ENST00000430071 GAB4Q2WGN9 574 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 VWA3BQ502W6 1294 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 ZC3H14Q6PJT7 736 aaKnown RBP17.92■□□□□ 0.46
UBE3D-204ENST00000430071 APTXQ7Z2E3 356 aaKnown RBP17.92■□□□□ 0.46
UBE3D-204ENST00000430071 SPEM1Q8N4L4 309 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 LMO3Q8TAP4 145 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 TATDN2Q93075 761 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 FBXO32Q969P5 355 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 TNIP3Q96KP6 325 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 CEP295NLQ96MC4 621 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 NDST4Q9H3R1 872 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 SEMA4AQ9H3S1 761 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 IL37Q9NZH6 218 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 LIMA1Q9UHB6 759 aaKnown RBP17.92■□□□□ 0.46
UBE3D-204ENST00000430071 CPQQ9Y646 472 aa17.92■□□□□ 0.46
UBE3D-204ENST00000430071 CHURC1-FNTBB4DL54 471 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 TRDMT1O14717 391 aaKnown RBP17.91■□□□□ 0.46
UBE3D-204ENST00000430071 TCF3P15923 654 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 IFNAR2P48551 515 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 FNTBP49356 437 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 SLC7A9P82251 487 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 INCA1Q0VD86 236 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 LRRC32Q14392 662 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 PDGFRLQ15198 375 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 DGKKQ5KSL6 1271 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 HEATR6Q6AI08 1181 aaKnown RBP17.91■□□□□ 0.46
UBE3D-204ENST00000430071 ATRIPQ8WXE1 791 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 JAKMIP2Q96AA8 810 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 SMARCD1Q96GM5 515 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 ARID3AQ99856 593 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 IMPG2Q9BZV3 1241 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 VPS16Q9H269 839 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 CCSER2Q9H7U1 834 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 DMAP1Q9NPF5 467 aaPredicted RBP17.91■□□□□ 0.46
UBE3D-204ENST00000430071 GMIPQ9P107 970 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 PCDHGA2Q9Y5H1 932 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 SPTBN2O15020 2390 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 HHLA1C9JL84 531 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 COCHO43405 550 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 P4HA1P13674 534 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 CCR3P51677 355 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 MESP2Q0VG99 397 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 LPAL2Q16609 132 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 C1orf228Q6PIY5 440 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 UNC93AQ86WB7 457 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 ZFRQ96KR1 1074 aaKnown RBP17.91■□□□□ 0.46
UBE3D-204ENST00000430071 SLITRK1Q96PX8 696 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 CRACR2AQ9BSW2 395 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 NIF3L1Q9GZT8 377 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 INTS2Q9H0H0 1204 aaKnown RBP17.91■□□□□ 0.46
UBE3D-204ENST00000430071 CSNK1G1Q9HCP0 422 aa17.91■□□□□ 0.46
UBE3D-204ENST00000430071 THADAQ6YHU6 1953 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 NUP205Q92621 2012 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 HRO43593 1189 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 CILPO75339 1184 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 RTN3O95197 1032 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-204ENST00000430071 CDK11BP21127 795 aaKnown RBP17.9■□□□□ 0.46
UBE3D-204ENST00000430071 PXNP49023 591 aaPredicted RBP17.9■□□□□ 0.46
UBE3D-204ENST00000430071 COPB1P53618 953 aaKnown RBP17.9■□□□□ 0.46
UBE3D-204ENST00000430071 LRMPQ12912 555 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 ZNF394Q53GI3 561 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 CLEC20AQ6ZU45 233 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 SFTPA1Q8IWL2 248 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 KIAA2013Q8IYS2 634 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 EHBP1Q8NDI1 1231 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 CFAP97Q9P2B7 532 aa17.9■□□□□ 0.46
UBE3D-204ENST00000430071 ATP8B3O60423 1300 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 FAM92AA1XBS5 289 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 LRRC10BA6NIK2 292 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 PES1O00541 588 aaKnown RBP17.89■□□□□ 0.45
UBE3D-204ENST00000430071 RNF40O75150 1001 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 MBL2P11226 248 aaPredicted RBP17.89■□□□□ 0.45
UBE3D-204ENST00000430071 OPRD1P41143 372 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 CETN1Q12798 172 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 PPP1R26Q5T8A7 1209 aaPredicted RBP17.89■□□□□ 0.45
UBE3D-204ENST00000430071 CPA6Q8N4T0 437 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 CCDC150Q8NCX0 1101 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 ATP2A3Q93084 1043 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 CYFIP2Q96F07 1278 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 HNRNPABQ99729 332 aaKnown RBP17.89■□□□□ 0.45
UBE3D-204ENST00000430071 P2RY13Q9BPV8 354 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 IER2Q9BTL4 223 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 OSER1Q9NX31 292 aa17.89■□□□□ 0.45
UBE3D-204ENST00000430071 SMG5Q9UPR3 1016 aaKnown RBP17.89■□□□□ 0.45
UBE3D-204ENST00000430071 CEP192Q8TEP8 1941 aa17.88■□□□□ 0.45
UBE3D-204ENST00000430071 GTPBP10A4D1E9 387 aaKnown RBP17.88■□□□□ 0.45
UBE3D-204ENST00000430071 TBX18O95935 607 aa17.88■□□□□ 0.45
UBE3D-204ENST00000430071 CYP17A1P05093 508 aa17.88■□□□□ 0.45
UBE3D-204ENST00000430071 ZDHHC11BP0C7U3 371 aa17.88■□□□□ 0.45
UBE3D-204ENST00000430071 SLC9A1P19634 815 aa17.88■□□□□ 0.45
UBE3D-204ENST00000430071 PPP3CCP48454 512 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms