RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 SPDYE16A6NNV3 312 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 GCNT3O95395 438 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TSPY3P0CV98 308 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TSPY8P0CW00 308 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DSG3P32926 999 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 CDK8P49336 464 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 KCTD21Q4G0X4 260 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ZNF362Q5T0B9 420 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 C1orf146Q5VVC0 180 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PPP4R4Q6NUP7 873 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PROSER2Q86WR7 435 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 ZNF354CQ86Y25 554 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PDIK1LQ8N165 341 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DHX38Q92620 1227 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 KAT5Q92993 513 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 HSPBAP1Q96EW2 488 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TRIM11Q96F44 468 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 GCNAQ96QF7 691 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 UHRF1Q96T88 793 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 CYTH2Q99418 400 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 HIPK3Q9H422 1215 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TUFT1Q9NNX1 390 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 RIC8BQ9NVN3 520 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ASXL3Q9C0F0 2248 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 EMSYQ7Z589 1322 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DLGAP1O14490 977 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ZBTB5O15062 677 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 CYP3A4P08684 503 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 S100A1P23297 94 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ACVR2AP27037 513 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 CDKN2BP42772 138 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 C1QBPQ07021 282 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 NANOGP8Q6NSW7 305 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TIFABQ6ZNK6 161 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PYDC1Q8WXC3 89 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DLG3Q92796 817 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DUS3LQ96G46 650 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 CLPTM1LQ96KA5 538 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TMEM120AQ9BXJ8 343 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 C20orf27Q9GZN8 174 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PICK1Q9NRD5 415 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 CEPT1Q9Y6K0 416 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PHF3Q92576 2039 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 VPS13AQ96RL7 3174 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 COL11A2P13942 1736 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 FUOMA2VDF0 154 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 FOSP01100 380 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 GNL1P36915 607 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 PPARGP37231 505 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 ENTPD1P49961 510 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TRIP10Q15642 601 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 KLHL38Q2WGJ6 581 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PPP1R2P3Q6NXS1 205 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 BBS12Q6ZW61 710 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 GPR180Q86V85 440 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 MCOLN2Q8IZK6 566 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 TMC2Q8TDI7 906 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DYDC2Q96IM9 177 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 COX4I2Q96KJ9 171 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PWWP2AQ96N64 755 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 RHBDL2Q9NX52 303 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DUS2Q9NX74 493 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 DOCK10Q96BY6 2186 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 DENND4AQ7Z401 1863 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ICE1Q9Y2F5 2266 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 GAKO14976 1311 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 H3BNH8 94 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TRDMT1O14717 391 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 OPHN1O60890 802 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 RFTN1Q14699 578 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 TMED2Q15363 201 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 SLX4IPQ5VYV7 408 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 GADL1Q6ZQY3 521 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 SLC7A3Q8WY07 619 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ABHD8Q96I13 439 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ZNF778Q96MU6 729 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 EIF2AQ9BY44 585 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 FRMD8P1Q9BZ68 369 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 Q9H521 79 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TRANK1O15050 2925 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 POC1B-GALNT4F8VUJ3 575 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 WEE2P0C1S8 567 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TRIM49P0CI25 452 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TRIM49CP0CI26 452 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 PHBP35232 272 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 GJA8P48165 433 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 MXI1P50539 228 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 NCOA4Q13772 614 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 ZNF746Q6NUN9 644 aaPredicted RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 INTS5Q6P9B9 1019 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 RSPH3Q86UC2 560 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 CPSF7Q8N684 471 aaKnown RBP5.34□□□□□ -1.55
RIF1-203ENST00000428287 ACTL9Q8TC94 416 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 KCNK16Q96T55 309 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 TMEM260Q9NX78 707 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 HACD3Q9P035 362 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 INPP5FQ9Y2H2 1132 aa5.34□□□□□ -1.55
RIF1-203ENST00000428287 VCANP13611 3396 aa5.34□□□□□ -1.56
RIF1-203ENST00000428287 IGLV3-22A0A075B6J6 115 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms