RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 TTC39CQ8N584 583 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 KIAA1958Q8N8K9 716 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 ZSWIM1Q9BR11 485 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 FAM124BQ9H5Z6 455 aaPredicted RBP20.22■□□□□ 0.83
COL9A2-204ENST00000427563 ZSCAN32Q9NX65 697 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 FRYLO94915 3013 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 GPR179Q6PRD1 2367 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 OTOGLQ3ZCN5 2332 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 RNF225M0QZC1 329 aaPredicted RBP20.21■□□□□ 0.83
COL9A2-204ENST00000427563 TLR5O60602 858 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 CALCAP01258 141 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 CCR3P51677 355 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 KCNH2Q12809 1159 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 SUMF1Q8NBK3 374 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 P2RY13Q9BPV8 354 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 KLF16Q9BXK1 252 aaPredicted RBP20.21■□□□□ 0.83
COL9A2-204ENST00000427563 CYLDQ9NQC7 956 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 TLR8Q9NR97 1041 aaKnown RBP20.21■□□□□ 0.83
COL9A2-204ENST00000427563 LMBRD1Q9NUN5 540 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 RWDD2AQ9UIY3 292 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 NUDT5Q9UKK9 219 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 EML5Q05BV3 1969 aa20.21■□□□□ 0.83
COL9A2-204ENST00000427563 WDR87Q6ZQQ6 2873 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 MDM4O15151 490 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 PAPSS2O95340 614 aaPredicted RBP20.2■□□□□ 0.82
COL9A2-204ENST00000427563 CXCL12P48061 93 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 GRSF1Q12849 480 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL9A2-204ENST00000427563 DHCR24Q15392 516 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 RAB41Q5JT25 222 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 RHBDF2Q6PJF5 856 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 BHLHA9Q7RTU4 235 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 CCDC186Q7Z3E2 898 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 PIGZQ86VD9 579 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 C12orf40Q86WS4 652 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 SFTPA1Q8IWL2 248 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 SYNPOQ8N3V7 929 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 ANKRD52Q8NB46 1076 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 TFAP2BQ92481 460 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.2■□□□□ 0.82
COL9A2-204ENST00000427563 PCDHGA2Q9Y5H1 932 aa20.2■□□□□ 0.82
COL9A2-204ENST00000427563 PTPRZ1P23471 2315 aaPredicted RBP20.19■□□□□ 0.82
COL9A2-204ENST00000427563 E2F8A0AVK6 867 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 P4HA2O15460 535 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 GABBR2O75899 941 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 NFATC1O95644 943 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 CHRM1P11229 460 aaPredicted RBP20.19■□□□□ 0.82
COL9A2-204ENST00000427563 TRIM21P19474 475 aaKnown RBP20.19■□□□□ 0.82
COL9A2-204ENST00000427563 TBXAS1P24557 533 aaPredicted RBP20.19■□□□□ 0.82
COL9A2-204ENST00000427563 GOLGA7BQ2TAP0 167 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 PKDCCQ504Y2 493 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 ZC3H14Q6PJT7 736 aaKnown RBP20.19■□□□□ 0.82
COL9A2-204ENST00000427563 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
COL9A2-204ENST00000427563 BBS7Q8IWZ6 715 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 EHBP1Q8NDI1 1231 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 CD101Q93033 1021 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 KREMEN1Q96MU8 473 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 NT5C1BQ96P26 610 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 UBXN6Q9BZV1 441 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 SEMA4AQ9H3S1 761 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 TSPAN16Q9UKR8 245 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 GVINP1Q7Z2Y8 2422 aa20.19■□□□□ 0.82
COL9A2-204ENST00000427563 O00370 1275 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 RNF40O75150 1001 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 GNA14O95837 355 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 LMNAP02545 664 aaKnown RBP20.18■□□□□ 0.82
COL9A2-204ENST00000427563 AFPP02771 609 aaKnown RBP20.18■□□□□ 0.82
COL9A2-204ENST00000427563 IRF1P10914 325 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 RARGP13631 454 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 SLC6A11P48066 632 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 PDE4CQ08493 712 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 RRAGAQ7L523 313 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 PPM1KQ8N3J5 372 aa20.18■□□□□ 0.82
COL9A2-204ENST00000427563 NDRG1Q92597 394 aaKnown RBP20.18■□□□□ 0.82
COL9A2-204ENST00000427563 CNOT6LQ96LI5 555 aaKnown RBP20.18■□□□□ 0.82
COL9A2-204ENST00000427563 EP300Q09472 2414 aaPredicted RBP20.17■□□□□ 0.82
COL9A2-204ENST00000427563 CHURC1-FNTBB4DL54 471 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 DRD1P21728 446 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 FNTBP49356 437 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 ZNF132P52740 706 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 DPCR1Q3MIW9 517 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 SGO2Q562F6 1265 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 TMEM270Q6UE05 265 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 UBA3Q8TBC4 463 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 P2RY11Q96G91 374 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 FAM126AQ9BYI3 521 aaPredicted RBP20.17■□□□□ 0.82
COL9A2-204ENST00000427563 INTS2Q9H0H0 1204 aaKnown RBP20.17■□□□□ 0.82
COL9A2-204ENST00000427563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.17■□□□□ 0.82
COL9A2-204ENST00000427563 ZNF292O60281 2723 aa20.17■□□□□ 0.82
COL9A2-204ENST00000427563 K7EQS6 105 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 VDRP11473 427 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 CD19P15391 556 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 YWHAEP62258 255 aaKnown RBP20.16■□□□□ 0.82
COL9A2-204ENST00000427563 AMPD2Q01433 879 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 APBA1Q02410 837 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 NR1H3Q13133 447 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 SRSF5Q13243 272 aaKnown RBP20.16■□□□□ 0.82
COL9A2-204ENST00000427563 LY6G5CQ5SRR4 150 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 PHTF2Q8N3S3 785 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 MLKLQ8NB16 471 aa20.16■□□□□ 0.82
COL9A2-204ENST00000427563 EPC1Q9H2F5 836 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms