RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 UTP11Q9Y3A2 253 aaKnown RBP18.15■□□□□ 0.5
FN1-208ENST00000426059 TRAPPC3O43617 180 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 HSPA1AP0DMV8 641 aaKnown RBP18.15■□□□□ 0.5
FN1-208ENST00000426059 HSPA1BP0DMV9 641 aaKnown RBP18.15■□□□□ 0.5
FN1-208ENST00000426059 ACRP10323 421 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 CETN2P41208 172 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 CDH6P55285 790 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 ARPP19P56211 112 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 SND1Q7KZF4 910 aaKnown RBP eCLIP18.15■□□□□ 0.53e-6■■■□□ 16.3
FN1-208ENST00000426059 PRUNE1Q86TP1 453 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 SPATA2LQ8IUW3 424 aaPredicted RBP18.15■□□□□ 0.5
FN1-208ENST00000426059 C12orf50Q8NA57 414 aaPredicted RBP18.15■□□□□ 0.5
FN1-208ENST00000426059 SCAMP5Q8TAC9 235 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 ADAM32Q8TC27 787 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 SPATA18Q8TC71 538 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 DDX23Q9BUQ8 820 aaKnown RBP18.15■□□□□ 0.5
FN1-208ENST00000426059 CSNK1G1Q9HCP0 422 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 SNX24Q9Y343 169 aa18.15■□□□□ 0.5
FN1-208ENST00000426059 OAZ2O95190 189 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 PARNO95453 639 aaKnown RBP18.14■□□□□ 0.49
FN1-208ENST00000426059 PAX3P23760 479 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 ECHS1P30084 290 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 MATKP42679 507 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 DHX34Q14147 1143 aaKnown RBP18.14■□□□□ 0.49
FN1-208ENST00000426059 CASP8Q14790 479 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 TRIP13Q15645 432 aaPredicted RBP18.14■□□□□ 0.49
FN1-208ENST00000426059 PPP2R5EQ16537 467 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 MAP9Q49MG5 647 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 RAB41Q5JT25 222 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 SDHAF4Q5VUM1 108 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 CNKSR3Q6P9H4 555 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 CMASQ8NFW8 434 aaPredicted RBP18.14■□□□□ 0.49
FN1-208ENST00000426059 CCDC114Q96M63 670 aa18.14■□□□□ 0.49
FN1-208ENST00000426059 C11orf84Q9BUA3 381 aaPredicted RBP18.14■□□□□ 0.49
FN1-208ENST00000426059 ARHGEF37A1IGU5 675 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 HSF2BPO75031 334 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 FYNP06241 537 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 SULT1E1P49888 294 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 DAOAP59103 153 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 DEFB103AP81534 67 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 CTXN3Q4LDR2 81 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 FUT10Q6P4F1 479 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 RUBCNQ92622 972 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 ERP44Q9BS26 406 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 SNRNP25Q9BV90 132 aaKnown RBP18.13■□□□□ 0.49
FN1-208ENST00000426059 COLEC11Q9BWP8 271 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 TMPRSS4Q9NRS4 437 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.13■□□□□ 0.49
FN1-208ENST00000426059 BHMG1C9JSJ3 638 aaPredicted RBP18.13■□□□□ 0.49
FN1-208ENST00000426059 HOXA2O43364 376 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 CST8O60676 142 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 TJP3O95049 919 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 TNFRSF8P28908 595 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 GRIK1P39086 918 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 PTPN9P43378 593 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 COPS2P61201 443 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 PKN2Q16513 984 aaKnown RBP18.13■□□□□ 0.49
FN1-208ENST00000426059 RTP2Q5QGT7 225 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 MTERF4Q7Z6M4 381 aaKnown RBP18.13■□□□□ 0.49
FN1-208ENST00000426059 FAM131BQ86XD5 332 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 SCN4BQ8IWT1 228 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 CCDC185Q8N715 623 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 ANKLE1Q8NAG6 615 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 MAIP1Q8WWC4 291 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 EDEM1Q92611 657 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 C10orf88Q9H8K7 445 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 DMAP1Q9NPF5 467 aaPredicted RBP18.13■□□□□ 0.49
FN1-208ENST00000426059 DNPEPQ9ULA0 475 aa18.13■□□□□ 0.49
FN1-208ENST00000426059 ZBED1O96006 694 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 SCNN1AP37088 669 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 FNTAP49354 379 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 GPR15P49685 360 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 OTUD1Q5VV17 481 aaPredicted RBP18.12■□□□□ 0.49
FN1-208ENST00000426059 DUPD1Q68J44 220 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 RSPO2Q6UXX9 243 aaPredicted RBP18.12■□□□□ 0.49
FN1-208ENST00000426059 TTC9BQ8N6N2 239 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 CENPIQ92674 756 aaPredicted RBP18.12■□□□□ 0.49
FN1-208ENST00000426059 MRPL9Q9BYD2 267 aaKnown RBP18.12■□□□□ 0.49
FN1-208ENST00000426059 ZCWPW1Q9H0M4 648 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 DGKIO75912 1065 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 ECEL1O95672 775 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 EPHB4P54760 987 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 KRT17Q04695 432 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 NME3Q13232 169 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 MAPRE1Q15691 268 aaKnown RBP18.12■□□□□ 0.49
FN1-208ENST00000426059 PPP6R3Q5H9R7 873 aaPredicted RBP18.12■□□□□ 0.49
FN1-208ENST00000426059 FAM182AQ5T1J6 154 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 BHLHA9Q7RTU4 235 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 HDXQ7Z353 690 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 NECAB2Q7Z6G3 386 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 RFX6Q8HWS3 928 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 LRRC43Q8N309 656 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 POPDC2Q9HBU9 364 aa18.12■□□□□ 0.49
FN1-208ENST00000426059 FAM187AA6NFU0 413 aa18.11■□□□□ 0.49
FN1-208ENST00000426059 M0QYT0 321 aa18.11■□□□□ 0.49
FN1-208ENST00000426059 CAPN9O14815 690 aa18.11■□□□□ 0.49
FN1-208ENST00000426059 DAB1O75553 588 aa18.11■□□□□ 0.49
FN1-208ENST00000426059 SOAT2O75908 522 aa18.11■□□□□ 0.49
FN1-208ENST00000426059 TIMP1P01033 207 aa18.11■□□□□ 0.49
FN1-208ENST00000426059 NCAM1P13591 858 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms