RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 GRSF1Q12849 480 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 DHCR24Q15392 516 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 RAB41Q5JT25 222 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 RHBDF2Q6PJF5 856 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 IRF2BP1Q8IU81 584 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 SUMF1Q8NBK3 374 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 KLF16Q9BXK1 252 aaPredicted RBP19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 CYLDQ9NQC7 956 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 TLR8Q9NR97 1041 aaKnown RBP19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 LMBRD1Q9NUN5 540 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 PCDHGA2Q9Y5H1 932 aa19.34■□□□□ 0.69
SMARCAL1-205ENST00000425815 E2F8A0AVK6 867 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 ANTXRLA6NF34 631 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 PAPSS2O95340 614 aaPredicted RBP19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 NFATC1O95644 943 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 LMNAP02545 664 aaKnown RBP19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 CYP17A1P05093 508 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 AMPD2Q01433 879 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 ZC3H14Q6PJT7 736 aaKnown RBP19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 PIGZQ86VD9 579 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 ARHGEF19Q8IW93 802 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 CD101Q93033 1021 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 ZSWIM1Q9BR11 485 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 POLR3BQ9NW08 1133 aaPredicted RBP19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 NUDT5Q9UKK9 219 aa19.33■□□□□ 0.68
SMARCAL1-205ENST00000425815 RARGP13631 454 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 DRD1P21728 446 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 TBXAS1P24557 533 aaPredicted RBP19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 NR1H3Q13133 447 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 PKDCCQ504Y2 493 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 RRAGAQ7L523 313 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 CCDC186Q7Z3E2 898 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 DDX42Q86XP3 938 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 TFAP2BQ92481 460 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 NT5C1BQ96P26 610 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 FAM126AQ9BYI3 521 aaPredicted RBP19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 DNAI2Q9GZS0 605 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 TSPAN16Q9UKR8 245 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 PATJQ8NI35 1801 aa19.32■□□□□ 0.68
SMARCAL1-205ENST00000425815 SLC9A3R1O14745 358 aaPredicted RBP19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 MDM4O15151 490 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 CALCAP01258 141 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 AFPP02771 609 aaKnown RBP19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 VDRP11473 427 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 SLC6A11P48066 632 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 YWHAEP62258 255 aaKnown RBP19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 PDE4CQ08493 712 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 MESP2Q0VG99 397 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 GOLGA7BQ2TAP0 167 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 TMEM270Q6UE05 265 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 BHLHA9Q7RTU4 235 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 BBS7Q8IWZ6 715 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 PPM1KQ8N3J5 372 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 ZNF276Q8N554 614 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 MLKLQ8NB16 471 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 ATRIPQ8WXE1 791 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 NDRG1Q92597 394 aaKnown RBP19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 KREMEN1Q96MU8 473 aa19.31■□□□□ 0.68
SMARCAL1-205ENST00000425815 ZNF638Q14966 1978 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 CHURC1-FNTBB4DL54 471 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 K7EQS6 105 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 O00370 1275 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 RNF40O75150 1001 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 GABBR2O75899 941 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 ATP5C1P36542 298 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 SGO2Q562F6 1265 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 PM20D1Q6GTS8 502 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 KLHDC10Q6PID8 442 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 HTR3DQ70Z44 454 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 C12orf40Q86WS4 652 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 SFTPA1Q8IWL2 248 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 UBA3Q8TBC4 463 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 INTS2Q9H0H0 1204 aaKnown RBP19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 TBC1D14Q9P2M4 693 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 KIAA1257Q9ULG3 409 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 PCDHB4Q9Y5E5 795 aa19.3■□□□□ 0.68
SMARCAL1-205ENST00000425815 XPO1O14980 1071 aaKnown RBP19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 HRO43593 1189 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 FGFR1OPO95684 399 aaKnown RBP19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 PAEPP09466 180 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 CCDC192P0DO97 292 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 IRF1P10914 325 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 CHRM1P11229 460 aaPredicted RBP19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 CD19P15391 556 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 HOXA6P31267 233 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 FNTBP49356 437 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 ZNF132P52740 706 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 NRLP54845 237 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 GCNT1Q02742 428 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 CETN1Q12798 172 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 LY6G5CQ5SRR4 150 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 EPC1Q9H2F5 836 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 CLIC5Q9NZA1 410 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 NAGPAQ9UK23 515 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 CNTN6Q9UQ52 1028 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 SH3BP1Q9Y3L3 701 aa19.29■□□□□ 0.68
SMARCAL1-205ENST00000425815 A0A0A0MRY4 1105 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms