RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 RRN3P2A6NIE6 340 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 TCEA3O75764 348 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 CTSHP09668 335 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 RARBP10826 455 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 IL4RP24394 825 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 PCK1P35558 622 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 HDAC4P56524 1084 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 TWF2Q6IBS0 349 aaKnown RBP12.06□□□□□ -0.48
UBR4-207ENST00000425413 RELL1Q8IUW5 271 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 PYROXD2Q8N2H3 581 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 ARRDC4Q8NCT1 418 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 SLC35F5Q8WV83 523 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 SMC6Q96SB8 1091 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 SNX25Q9H3E2 840 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 UBN1Q9NPG3 1134 aa12.06□□□□□ -0.48
UBR4-207ENST00000425413 TIMM13Q9Y5L4 95 aaPredicted RBP12.06□□□□□ -0.48
UBR4-207ENST00000425413 KPNA7A9QM74 516 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 ZBED1O96006 694 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 APRTP07741 180 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 ABHD2P08910 425 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 GBE1Q04446 702 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 NOMO1Q15155 1222 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 SLC1A5Q15758 541 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 TAZQ16635 292 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 FAM131BQ86XD5 332 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 PQLC3Q8N755 202 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 ATP11CQ8NB49 1132 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 PAFAH2Q99487 392 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 FOXP3Q9BZS1 431 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 RRAGCQ9HB90 399 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 PIH1D1Q9NWS0 290 aaKnown RBP12.05□□□□□ -0.48
UBR4-207ENST00000425413 EURLQ9NYK6 297 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 RABGEF1Q9UJ41 708 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 CITO14578 2027 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 NRCAMQ92823 1304 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 A6NJR5 290 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 APOL1O14791 398 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 F2P00734 622 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 RDXP35241 583 aaKnown RBP12.05□□□□□ -0.48
UBR4-207ENST00000425413 AFF1P51825 1210 aaKnown RBP12.05□□□□□ -0.48
UBR4-207ENST00000425413 PITX1P78337 314 aaPredicted RBP12.05□□□□□ -0.48
UBR4-207ENST00000425413 TFDP2Q14188 446 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 TRPM8Q7Z2W7 1104 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 MAP7D3Q8IWC1 876 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 KBTBD7Q8WVZ9 684 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 CEP41Q9BYV8 373 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 KIAA1257Q9ULG3 409 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 GRID1Q9ULK0 1009 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 EFR3BQ9Y2G0 817 aa12.05□□□□□ -0.48
UBR4-207ENST00000425413 USP15Q9Y4E8 981 aaPredicted RBP12.05□□□□□ -0.48
UBR4-207ENST00000425413 KBTBD13C9JR72 458 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 UBOX5O94941 541 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 TKTP29401 623 aaKnown RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 PSEN2P49810 448 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 HUNKP57058 714 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 ZBTB6Q15916 424 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 SPATA21Q7Z572 469 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 CTU1Q7Z7A3 348 aaKnown RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 CTAGE3PQ8IX95 158 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 CCDC185Q8N715 623 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 SLC4A5Q9BY07 1137 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 CCDC134Q9H6E4 229 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 CD248Q9HCU0 757 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 SLC40A1Q9NP59 571 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 PSMC3IPQ9P2W1 217 aaPredicted RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 GGA2Q9UJY4 613 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 PLXNA1Q9UIW2 1896 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 PLXNB2O15031 1838 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 IGF2BP3O00425 579 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBR4-207ENST00000425413 FAM155BO75949 473 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 TAC1P20366 129 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 GEMIN4P57678 1058 aaKnown RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 RNASELQ05823 741 aaKnown RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 PKDCCQ504Y2 493 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 CEP128Q6ZU80 1094 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 PCGF5Q86SE9 256 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 PITPNM3Q9BZ71 974 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 PLEKHA5Q9HAU0 1116 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 ETNK2Q9NVF9 386 aa12.04□□□□□ -0.48
UBR4-207ENST00000425413 UBQLN1Q9UMX0 589 aaKnown RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 ATXN2Q99700 1313 aaKnown RBP12.04□□□□□ -0.48
UBR4-207ENST00000425413 CYP2F1P24903 491 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 MSH2P43246 934 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 NDUFV1P49821 464 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 GSCP56915 257 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 IL9RQ01113 521 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 ACAP1Q15027 740 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 TAF1CQ15572 869 aaPredicted RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 HHATQ5VTY9 493 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 CGB2Q6NT52 195 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 PPP1R21Q6ZMI0 780 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 TMEM110Q86TL2 294 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 CCDC63Q8NA47 563 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 RNF169Q8NCN4 708 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 APPL2Q8NEU8 664 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 RMDN2Q96LZ7 410 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 TBCBQ99426 244 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 USP29Q9HBJ7 922 aa12.03□□□□□ -0.48
UBR4-207ENST00000425413 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
UBR4-207ENST00000425413 IPPQ9Y573 584 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms