RNA–Protein interactions for RNA: ENST00000423945.5

SBDSP1-202, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 3 BASIC

Gene SBDSP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-202ENST00000423945 MLKLQ8NB16 471 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 ANKRD52Q8NB46 1076 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 EHBP1Q8NDI1 1231 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 CNOT6LQ96LI5 555 aaKnown RBP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 ZSWIM1Q9BR11 485 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 CYLDQ9NQC7 956 aa18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 TLR8Q9NR97 1041 aaKnown RBP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.81■□□□□ 0.6
SBDSP1-202ENST00000423945 GREM1O60565 184 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 EGFP01133 1207 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 CALCAP01258 141 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 CYP17A1P05093 508 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 GOLGA7BQ2TAP0 167 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 DPCR1Q3MIW9 517 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 RAB41Q5JT25 222 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 CCDC186Q7Z3E2 898 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 PIGZQ86VD9 579 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 PPM1KQ8N3J5 372 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 ZBTB44Q8NCP5 570 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 TFAP2BQ92481 460 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 NKD2Q969F2 451 aaPredicted RBP18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 KREMEN1Q96MU8 473 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 KLF16Q9BXK1 252 aaPredicted RBP18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 UBXN6Q9BZV1 441 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 NUP62CLQ9H1M0 184 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 MTPAPQ9NVV4 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 TSPAN16Q9UKR8 245 aa18.8■□□□□ 0.6
SBDSP1-202ENST00000423945 FAM186AA6NE01 2351 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 E2F8A0AVK6 867 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 O00370 1275 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 NFATC1O95644 943 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 CCDC192P0DO97 292 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 OPRD1P41143 372 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 YWHAEP62258 255 aaKnown RBP18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 PDE4CQ08493 712 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 PKDCCQ504Y2 493 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 SGO2Q562F6 1265 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 TMEM270Q6UE05 265 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 RRAGAQ7L523 313 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 DDX42Q86XP3 938 aaKnown RBP eCLIP18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 GPT2Q8TD30 523 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 P2RY13Q9BPV8 354 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 DNAI2Q9GZS0 605 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 INTS2Q9H0H0 1204 aaKnown RBP18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 NUDT5Q9UKK9 219 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 FRYLO94915 3013 aa18.79■□□□□ 0.6
SBDSP1-202ENST00000423945 CFAP54Q96N23 3096 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 ANTXRLA6NF34 631 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 K7ESF4 209 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 MDM4O15151 490 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 LILRB5O75023 590 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 PAPSS2O95340 614 aaPredicted RBP18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 VDRP11473 427 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 RARGP13631 454 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 CD19P15391 556 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 CCR3P51677 355 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 ZNF132P52740 706 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 GCNT1Q02742 428 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 MESP2Q0VG99 397 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 GRSF1Q12849 480 aaKnown RBP eCLIP18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 DHCR24Q15392 516 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 RHBDF2Q6PJF5 856 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 BHLHA9Q7RTU4 235 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 SYNPOQ8N3V7 929 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 CD101Q93033 1021 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 ZSCAN32Q9NX65 697 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 PCDHB4Q9Y5E5 795 aa18.78■□□□□ 0.6
SBDSP1-202ENST00000423945 GPR179Q6PRD1 2367 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 OTOGLQ3ZCN5 2332 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 XPO1O14980 1071 aaKnown RBP18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 GABBR2O75899 941 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 FGFR1OPO95684 399 aaKnown RBP18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 PAEPP09466 180 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 IRF1P10914 325 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 CXCL12P48061 93 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 AMPD2Q01433 879 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 DMWDQ09019 674 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 CETN1Q12798 172 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 C12orf40Q86WS4 652 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 BBS7Q8IWZ6 715 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 ZNF276Q8N554 614 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 UBA3Q8TBC4 463 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 NDRG1Q92597 394 aaKnown RBP18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 POLR3BQ9NW08 1133 aaPredicted RBP18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 NAGPAQ9UK23 515 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 PCDHGA2Q9Y5H1 932 aa18.77■□□□□ 0.6
SBDSP1-202ENST00000423945 SLC9A3R1O14745 358 aaPredicted RBP18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 RNF40O75150 1001 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 DRD1P21728 446 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 ATP5C1P36542 298 aaKnown RBP18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 SLC6A11P48066 632 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 TKTL1P51854 596 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 BCAT1P54687 386 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 APBA1Q02410 837 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 BST2Q10589 180 aaKnown RBP18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 NR1H3Q13133 447 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 PM20D1Q6GTS8 502 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 KLHDC10Q6PID8 442 aa18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 ZC3H14Q6PJT7 736 aaKnown RBP18.76■□□□□ 0.59
SBDSP1-202ENST00000423945 LCLAT1Q6UWP7 414 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 540.1 ms