RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 NFATC1O95644 943 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 TBX18O95935 607 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
SPC24-201ENST00000423327 MARSP56192 900 aaKnown RBP16.33■□□□□ 0.2
SPC24-201ENST00000423327 GRSF1Q12849 480 aaKnown RBP eCLIP16.33■□□□□ 0.2
SPC24-201ENST00000423327 CCDC40Q4G0X9 1142 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 ARHGAP17Q68EM7 881 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 SCD5Q86SK9 330 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 C12orf40Q86WS4 652 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 ADGRG2Q8IZP9 1017 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 SYNPOQ8N3V7 929 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 KIAA1958Q8N8K9 716 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 CD101Q93033 1021 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 HEXIM2Q96MH2 286 aaKnown RBP16.33■□□□□ 0.2
SPC24-201ENST00000423327 EPC1Q9H2F5 836 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 FBXO44Q9H4M3 255 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 FAM124BQ9H5Z6 455 aaPredicted RBP16.33■□□□□ 0.2
SPC24-201ENST00000423327 CYLDQ9NQC7 956 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 USP3Q9Y6I4 520 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 EML5Q05BV3 1969 aa16.33■□□□□ 0.2
SPC24-201ENST00000423327 A0A1W2PQH9 124 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 BICDL2A1A5D9 508 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 TULP2O00295 520 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 MDM4O15151 490 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 DHCR24Q15392 516 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 RHBDF2Q6PJF5 856 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 SFTPA1Q8IWL2 248 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 TRIML1Q8N9V2 468 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 FAM126AQ9BYI3 521 aaPredicted RBP16.32■□□□□ 0.2
SPC24-201ENST00000423327 TLR8Q9NR97 1041 aaKnown RBP16.32■□□□□ 0.2
SPC24-201ENST00000423327 NUDT5Q9UKK9 219 aa16.32■□□□□ 0.2
SPC24-201ENST00000423327 DCHS1Q96JQ0 3298 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 SPTBN4Q9H254 2564 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 E2F8A0AVK6 867 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 CHURC1-FNTBB4DL54 471 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 IRF1P10914 325 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 FNTBP49356 437 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 SRSF5Q13243 272 aaKnown RBP16.31■□□□□ 0.2
SPC24-201ENST00000423327 GOLGA7BQ2TAP0 167 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 RAB41Q5JT25 222 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 BHLHA9Q7RTU4 235 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 CCDC186Q7Z3E2 898 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 PIGZQ86VD9 579 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 DDX42Q86XP3 938 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPC24-201ENST00000423327 ARHGEF19Q8IW93 802 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 BBS7Q8IWZ6 715 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 DCLK2Q8N568 766 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 ATRIPQ8WXE1 791 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 KLF16Q9BXK1 252 aaPredicted RBP16.31■□□□□ 0.2
SPC24-201ENST00000423327 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
SPC24-201ENST00000423327 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.31■□□□□ 0.2
SPC24-201ENST00000423327 TSPAN16Q9UKR8 245 aa16.31■□□□□ 0.2
SPC24-201ENST00000423327 CALCAP01258 141 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 TRIM21P19474 475 aaKnown RBP16.3■□□□□ 0.2
SPC24-201ENST00000423327 DRD1P21728 446 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 SLC6A11P48066 632 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 AMPD2Q01433 879 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 KCNH2Q12809 1159 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 ANKRD52Q8NB46 1076 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 TFAP2BQ92481 460 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 P2RY11Q96G91 374 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 CLSTN2Q9H4D0 955 aa16.3■□□□□ 0.2
SPC24-201ENST00000423327 SMG5Q9UPR3 1016 aaKnown RBP16.3■□□□□ 0.2
SPC24-201ENST00000423327 DMXL1Q9Y485 3027 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 K7EQS6 105 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 RNF225M0QZC1 329 aaPredicted RBP16.29■□□□□ 0.2
SPC24-201ENST00000423327 O00370 1275 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 P4HA2O15460 535 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 HRO43593 1189 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 RARGP13631 454 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 TBXAS1P24557 533 aaPredicted RBP16.29■□□□□ 0.2
SPC24-201ENST00000423327 HOXA6P31267 233 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 PDE4CQ08493 712 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 NR1H3Q13133 447 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 PKDCCQ504Y2 493 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 LY6G5CQ5SRR4 150 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 HEATR6Q6AI08 1181 aaKnown RBP16.29■□□□□ 0.2
SPC24-201ENST00000423327 CLEC17AQ6ZS10 378 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 IRF2BP1Q8IU81 584 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 PHTF2Q8N3S3 785 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 RPLP0P6Q8NHW5 317 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 KREMEN1Q96MU8 473 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 NT5C1BQ96P26 610 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 RWDD2AQ9UIY3 292 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 DNAH14Q0VDD8 3507 aa16.29■□□□□ 0.2
SPC24-201ENST00000423327 SLC9A3R1O14745 358 aaPredicted RBP16.28■□□□□ 0.2
SPC24-201ENST00000423327 GABBR2O75899 941 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 ADH5P11766 374 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 PXNP49023 591 aaPredicted RBP16.28■□□□□ 0.2
SPC24-201ENST00000423327 NRLP54845 237 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 PPP2R5DQ14738 602 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 FBXO43Q4G163 708 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 SGO2Q562F6 1265 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 KLHDC10Q6PID8 442 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 TMEM270Q6UE05 265 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 HTR3DQ70Z44 454 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 RRAGAQ7L523 313 aa16.28■□□□□ 0.2
SPC24-201ENST00000423327 ETFBKMTQ8IXQ9 262 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms