RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 APRTP07741 180 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 STAG3L1P0CL83 205 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 GPD1P21695 349 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SERPINB4P48594 390 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SLC18A2Q05940 514 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 C4orf50Q6ZRC1 276 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 ZNF398Q8TD17 642 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SKA1Q96BD8 255 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 FAXDC2Q96IV6 333 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 FAM167AQ96KS9 214 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 MAGEB5Q9BZ81 275 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 C2orf40Q9H1Z8 148 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SMYD2Q9NRG4 433 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 TTLL3Q9Y4R7 772 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 CITO14578 2027 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 TOP3BO95985 862 aaKnown RBP16.44■□□□□ 0.22
CDH1-202ENST00000422392 C1QAP02745 245 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 IL4RP24394 825 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 ERFP50548 548 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 CDK16Q00536 496 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 KRT81Q14533 505 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 CA9Q16790 459 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 CES4AQ5XG92 561 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 RFX8Q6ZV50 586 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 FBXO16Q8IX29 292 aaPredicted RBP16.44■□□□□ 0.22
CDH1-202ENST00000422392 CXorf38Q8TB03 319 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 CCDC110Q8TBZ0 833 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SPDL1Q96EA4 605 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SPATA33Q96N06 139 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 BTBD10Q9BSF8 475 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 SPATC1LQ9H0A9 340 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 TLE6Q9H808 572 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 PLAC1Q9HBJ0 212 aa16.44■□□□□ 0.22
CDH1-202ENST00000422392 NGRNQ9NPE2 291 aaKnown RBP16.44■□□□□ 0.22
CDH1-202ENST00000422392 C2CD4BA6NLJ0 364 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 COPEO14579 308 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 PRPSAP2O60256 369 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 CCDC22O60826 627 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 NEBLO76041 1014 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 ENDOD1O94919 500 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 ZBTB7AO95365 584 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 STIP1P31948 543 aaKnown RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 GABRB2P47870 512 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 NDST1P52848 882 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 MDH1BQ5I0G3 518 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 PLD5Q8N7P1 536 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 RNF157Q96PX1 679 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 NMUR2Q9GZQ4 415 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 BATF3Q9NR55 127 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 CNTN3Q9P232 1028 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 TSPAN16Q9UKR8 245 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 NR2E3Q9Y5X4 410 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 A0A0G2JMZ2 1700 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 LRRC37A2A6NM11 1700 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 F5H423 210 aaPredicted RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 GYG2O15488 501 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 GSC2O15499 205 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 PDHA1P08559 390 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 KITP10721 976 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 VGLL4Q14135 290 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 KPNB1Q14974 876 aaKnown RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 PPP6R3Q5H9R7 873 aaPredicted RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 WASHC2DQ5SRD0 308 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 CAND1Q86VP6 1230 aaKnown RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 RIOX2Q8IUF8 465 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 ENDOVQ8N8Q3 282 aaKnown RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 ARMC2Q8NEN0 867 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 NSL1Q96IY1 281 aa16.43■□□□□ 0.22
CDH1-202ENST00000422392 IQCGQ9H095 443 aaKnown RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 MARCOQ9UEW3 520 aaPredicted RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 ZC3H7BQ9UGR2 993 aaKnown RBP16.43■□□□□ 0.22
CDH1-202ENST00000422392 KIF1CO43896 1103 aaKnown RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 SMNDC1O75940 238 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDH1-202ENST00000422392 MRPS5P82675 430 aaKnown RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 GADL1Q6ZQY3 521 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 SLC26A11Q86WA9 606 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 CHSY1Q86X52 802 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 PQLC3Q8N755 202 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 HPDLQ96IR7 371 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 CNPY3Q9BT09 278 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 RNPEPQ9H4A4 650 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 IFT122Q9HBG6 1241 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 TAS2R1Q9NYW7 299 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 LRRC42Q9Y546 428 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 ZNF638Q14966 1978 aaKnown RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 SOCS7O14512 581 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 KRT36O76013 467 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 TGFB3P10600 412 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 TFE3P19532 575 aaPredicted RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 PCK1P35558 622 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 CCDC14Q49A88 953 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 ACSBG2Q5FVE4 666 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 SPDYAQ5MJ70 313 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 CELF3Q5SZQ8 465 aaKnown RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 TRMT10BQ6PF06 316 aaKnown RBP16.42■□□□□ 0.22
CDH1-202ENST00000422392 MPP5Q8N3R9 675 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
CDH1-202ENST00000422392 FBXO27Q8NI29 283 aa16.42■□□□□ 0.22
CDH1-202ENST00000422392 WDR60Q8WVS4 1066 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms