RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 PFKPQ01813 784 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 SIGLEC14Q08ET2 396 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 C10orf120Q5SQS8 335 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 SNX30Q5VWJ9 437 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 TADA2BQ86TJ2 420 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 SH3RF2Q8TEC5 729 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 NOX5Q96PH1 765 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 NMUR1Q9HB89 426 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 CNGB3Q9NQW8 809 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 OBP2AQ9NY56 170 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 NUDT5Q9UKK9 219 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 CPQQ9Y646 472 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 MYO16Q9Y6X6 1858 aa16.56■□□□□ 0.24
BRAT1-202ENST00000421712 PATJQ8NI35 1801 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 STK25O00506 426 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 ATP5C1P36542 298 aaKnown RBP16.55■□□□□ 0.24
BRAT1-202ENST00000421712 TUBP50607 506 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 JAM2P57087 298 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 ZNF268Q14587 947 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-202ENST00000421712 MEA1Q16626 185 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 BTBD8Q5XKL5 378 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 TRIM67Q6ZTA4 783 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 RSRC2Q7L4I2 434 aaKnown RBP16.55■□□□□ 0.24
BRAT1-202ENST00000421712 SCD5Q86SK9 330 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 NOP9Q86U38 636 aaKnown RBP16.55■□□□□ 0.24
BRAT1-202ENST00000421712 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 IRF7Q92985 503 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 ZFYVE19Q96K21 471 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 LRRC3BQ96PB8 259 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 LHX5Q9H2C1 402 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 SYNCQ9H7C4 482 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 OSER1Q9NX31 292 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 CA14Q9ULX7 337 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 PCDHGC3Q9UN70 934 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 ARHGAP26Q9UNA1 814 aa16.55■□□□□ 0.24
BRAT1-202ENST00000421712 NUP210Q8TEM1 1887 aaPredicted RBP16.54■□□□□ 0.24
BRAT1-202ENST00000421712 FAM86C2PA6NEL3 165 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 TMEM221A6NGB7 291 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 M0R296 226 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 LEFTY2O00292 366 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 CBFA2T2O43439 604 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 FBXO21O94952 628 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 TBX18O95935 607 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 CCDC172P0C7W6 258 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 SLC7A9P82251 487 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 MTF1Q14872 753 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 ARHGAP29Q52LW3 1261 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 PM20D1Q6GTS8 502 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 SCUBE3Q8IX30 993 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 TMEM35BQ8NCS4 154 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 C1orf131Q8NDD1 294 aaKnown RBP16.54■□□□□ 0.24
BRAT1-202ENST00000421712 CSGALNACT1Q8TDX6 532 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 STK32AQ8WU08 396 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 RNF139Q8WU17 664 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 CDK5RAP1Q96SZ6 601 aaKnown RBP16.54■□□□□ 0.24
BRAT1-202ENST00000421712 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 XPO4Q9C0E2 1151 aaKnown RBP16.54■□□□□ 0.24
BRAT1-202ENST00000421712 MFSD1Q9H3U5 465 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 SLC2A4RGQ9NR83 387 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 GKN1Q9NS71 199 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 DNMT3LQ9UJW3 386 aa16.54■□□□□ 0.24
BRAT1-202ENST00000421712 FAM170AA1A519 330 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 YJEFN3A6XGL0 299 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 E7ENQ6 273 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 MDM4O15151 490 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 CHADO15335 359 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 MMEP08473 750 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 IRF1P10914 325 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 SNX16P57768 344 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 DAOAP59103 153 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 GOLGA8FQ08AF8 430 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 GOLGA8DPQ0D2H9 430 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 PDCLQ13371 301 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 BSPRYQ5W0U4 402 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 DDX42Q86XP3 938 aaKnown RBP eCLIP16.53■□□□□ 0.24
BRAT1-202ENST00000421712 SIX5Q8N196 739 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 EPS8L1Q8TE68 723 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 CLEC4CQ8WTT0 213 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 FAM149B1Q96BN6 582 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 PPP1R13BQ96KQ4 1090 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 C1QTNF1Q9BXJ1 281 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 CYLDQ9NQC7 956 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 SEPT11Q9NVA2 429 aaKnown RBP16.53■□□□□ 0.24
BRAT1-202ENST00000421712 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.53■□□□□ 0.24
BRAT1-202ENST00000421712 CLIC5Q9NZA1 410 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 CFAP97Q9P2B7 532 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 WNT16Q9UBV4 365 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 CYTH4Q9UIA0 394 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 RASAL2Q9UJF2 1139 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 SH3BP1Q9Y3L3 701 aa16.53■□□□□ 0.24
BRAT1-202ENST00000421712 E5RJQ4 531 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 GABBR2O75899 941 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 OLFM2O95897 454 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 FERP16591 822 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 IFNAR2P48551 515 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 KPNA1P52294 538 aaPredicted RBP16.52■□□□□ 0.24
BRAT1-202ENST00000421712 FCHO2Q0JRZ9 810 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 EFEMP1Q12805 493 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 ZNF77Q15935 545 aa16.52■□□□□ 0.24
BRAT1-202ENST00000421712 SLC44A4Q53GD3 710 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms