RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SLC25A11Q02978 314 aaKnown RBP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 ZNF211Q13398 564 aaPredicted RBP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 CDO1Q16878 200 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 LONRF2Q1L5Z9 754 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 USP41Q3LFD5 358 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 DCAF12L1Q5VU92 463 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 KIAA0319Q5VV43 1072 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 CC2D1AQ6P1N0 951 aaPredicted RBP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 FAM171BQ6P995 826 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 KCNT2Q6UVM3 1135 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 ARCQ7LC44 396 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 CREG2Q8IUH2 290 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 SCN4BQ8IWT1 228 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 CRIPAKQ8N1N5 446 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 SLC39A11Q8N1S5 342 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 ARHGAP18Q8N392 663 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 RASGEF1CQ8N431 466 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 FIBCD1Q8N539 461 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 COLGALT1Q8NBJ5 622 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 LRRN4CLQ8ND94 238 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 SPATA4Q8NEY3 305 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 EXD1Q8NHP7 514 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 JOSD2Q8TAC2 188 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 FAM172AQ8WUF8 416 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 RXFP2Q8WXD0 754 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 PIK3R5Q8WYR1 880 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 IRGQQ8WZA9 623 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 ALG3Q92685 438 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 TOP1MTQ969P6 601 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 IGSF21Q96ID5 467 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 PIWIL1Q96J94 861 aaKnown RBP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 TBCBQ99426 244 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 PKMYT1Q99640 499 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 SMOQ99835 787 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 LPIN3Q9BQK8 851 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 TMUB1Q9BVT8 246 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 ULBP1Q9BZM6 244 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 FAM204AQ9H8W3 233 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 CSNK1G1Q9HCP0 422 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 KLHL11Q9NVR0 708 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 RRN3Q9NYV6 651 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 SPG21Q9NZD8 308 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 EHD2Q9NZN4 543 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 MTRRQ9UBK8 725 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 TTC7AQ9ULT0 858 aaPredicted RBP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 RWDD3Q9Y3V2 267 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 PCDHB12Q9Y5F1 795 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 PCDHA3Q9Y5H8 950 aa6.24□□□□□ -1.41
HMGB3-202ENST00000419110 MRPL42Q9Y6G3 142 aaKnown RBP6.24□□□□□ -1.41
HMGB3-202ENST00000419110 TARSL2A2RTX5 802 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 MTMR11A4FU01 709 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 NT5C1B-RDH14C9J2C7 533 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 F8VP50 259 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 PDE2AO00408 941 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ERLIN1O75477 346 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RTN3O95197 1032 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 GJB5O95377 273 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ZBED1O96006 694 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 FGBP02675 491 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 LTFP02788 710 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TUBBP07437 444 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 OR4Q2P0C623 313 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 IGFBP6P24592 240 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ITGB8P26012 769 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 CA8P35219 290 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 PTPN7P35236 360 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RDXP35241 583 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 GRIK1P39086 918 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 MATKP42679 507 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ARPP19P56211 112 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TAS2R40P59535 323 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RNASE9P60153 205 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RPL10AP62906 217 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 MRPS5P82675 430 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ATP11AP98196 1134 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 OGDHQ02218 1023 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 ADCY1Q08828 1119 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 IFRD2Q12894 506 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 PLD1Q13393 1074 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 KRT81Q14533 505 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SMTNL2Q2TAL5 461 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 MAP9Q49MG5 647 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RAB41Q5JT25 222 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RTP2Q5QGT7 225 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 PAQR9Q6ZVX9 377 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SND1Q7KZF4 910 aaKnown RBP eCLIP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 RSRC2Q7L4I2 434 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 STRADAQ7RTN6 431 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 OTOP2Q7RTS6 562 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 GPRIN1Q7Z2K8 1008 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TMEM173Q86WV6 379 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 CPNE8Q86YQ8 564 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SLC13A5Q86YT5 568 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 SCML4Q8N228 414 aa6.23□□□□□ -1.41
HMGB3-202ENST00000419110 GPR161Q8N6U8 529 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 NOA1Q8NC60 698 aaKnown RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.23□□□□□ -1.41
HMGB3-202ENST00000419110 GRK7Q8WTQ7 553 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms