RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 CXorf38Q8TB03 319 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 ZNF398Q8TD17 642 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 MICAL1Q8TDZ2 1067 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 RNF157Q96PX1 679 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 SRPK1Q96SB4 655 aaKnown RBP15.33■□□□□ 0.04
LINC00475-202ENST00000416438 MAGEB5Q9BZ81 275 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 PLAC1Q9HBJ0 212 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 SAR1AQ9NR31 198 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 SMYD2Q9NRG4 433 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 LNPEPQ9UIQ6 1025 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 C2CD4BA6NLJ0 364 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 SOCS7O14512 581 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 CYB561D2O14569 222 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 PRPSAP2O60256 369 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 C1QAP02745 245 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 TGFB3P10600 412 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 GABRB2P47870 512 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 CPA2P48052 419 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 SERPINB4P48594 390 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 C4orf50Q6ZRC1 276 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 ALYREFQ86V81 257 aaKnown RBP15.33■□□□□ 0.04
LINC00475-202ENST00000416438 CCDC110Q8TBZ0 833 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 PTCD3Q96EY7 689 aaKnown RBP15.33■□□□□ 0.04
LINC00475-202ENST00000416438 RNPEPQ9H4A4 650 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 NGRNQ9NPE2 291 aaKnown RBP15.33■□□□□ 0.04
LINC00475-202ENST00000416438 TTLL3Q9Y4R7 772 aa15.33■□□□□ 0.04
LINC00475-202ENST00000416438 KAT6AQ92794 2004 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 COPEO14579 308 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 GSC2O15499 205 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
LINC00475-202ENST00000416438 APRTP07741 180 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CDK16Q00536 496 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 VGLL4Q14135 290 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 WASHC2DQ5SRD0 308 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CES4AQ5XG92 561 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 GADL1Q6ZQY3 521 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 RFX8Q6ZV50 586 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.32■□□□□ 0.04
LINC00475-202ENST00000416438 SKA1Q96BD8 255 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 HPDLQ96IR7 371 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 NSL1Q96IY1 281 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 BTBD10Q9BSF8 475 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CNPY3Q9BT09 278 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 TLE6Q9H808 572 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CNTN3Q9P232 1028 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 TSPAN16Q9UKR8 245 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 TNFSF13BQ9Y275 285 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 BRCA1P38398 1863 aaKnown RBP15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CCDC195A0A1B0GUA6 201 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 GYG2O15488 501 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CCDC22O60826 627 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 PCK1P35558 622 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CCDC14Q49A88 953 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 CAND1Q86VP6 1230 aaKnown RBP15.32■□□□□ 0.04
LINC00475-202ENST00000416438 PQLC3Q8N755 202 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 IFT122Q9HBG6 1241 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 BATF3Q9NR55 127 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 PDGFCQ9NRA1 345 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 ZC3H7BQ9UGR2 993 aaKnown RBP15.32■□□□□ 0.04
LINC00475-202ENST00000416438 LRRC42Q9Y546 428 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 NR2E3Q9Y5X4 410 aa15.32■□□□□ 0.04
LINC00475-202ENST00000416438 MGAMO43451 1857 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 A0A087WZ62 844 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 KITP10721 976 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 KPNB1Q14974 876 aaKnown RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 SLC10A6Q3KNW5 377 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 SH3D19Q5HYK7 790 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 MDH1BQ5I0G3 518 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 SLC26A11Q86WA9 606 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 ENDOVQ8N8Q3 282 aaKnown RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 ARMC2Q8NEN0 867 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 FAXDC2Q96IV6 333 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 FDXACB1Q9BRP7 624 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 NMUR2Q9GZQ4 415 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 IQCGQ9H095 443 aaKnown RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 TAS2R1Q9NYW7 299 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 F5H423 210 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 SMAPO00193 183 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 CHADO15335 359 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 LGR5O75473 907 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 NEBLO76041 1014 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 IL18RAPO95256 599 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 TOP3BO95985 862 aaKnown RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 PFKMP08237 780 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 VDRP11473 427 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 TFE3P19532 575 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 ERFP50548 548 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 TFDP2Q14188 446 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 HSF5Q4G112 596 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 PPP6R3Q5H9R7 873 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 SPDYAQ5MJ70 313 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 GJC2Q5T442 439 aaPredicted RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 TRMT10BQ6PF06 316 aaKnown RBP15.31■□□□□ 0.04
LINC00475-202ENST00000416438 CHSY1Q86X52 802 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 PCDH19Q8TAB3 1148 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 WDR60Q8WVS4 1066 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 SPDL1Q96EA4 605 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 FGD4Q96M96 766 aa15.31■□□□□ 0.04
LINC00475-202ENST00000416438 CXCL16Q9H2A7 254 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms