RNA–Protein interactions for RNA: ENST00000415772.5

SBDSP1-201, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 2

Gene SBDSP1, Length 733 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-201ENST00000415772 GRAMD4Q6IC98 578 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 KIAA1211LQ6NV74 962 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 SFTPA1Q8IWL2 248 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 KCNV2Q8TDN2 545 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 SCFD1Q8WVM8 642 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 XPO6Q96QU8 1125 aaKnown RBP16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 KCNK16Q96T55 309 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 SCNM1Q9BWG6 230 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 CCSER2Q9H7U1 834 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 MAGEF1Q9HAY2 307 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 SLC6A14Q9UN76 642 aa16.5■□□□□ 0.23
SBDSP1-201ENST00000415772 TGFB1I1O43294 461 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 CUTAO60888 179 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 TULP3O75386 442 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 HNRNPLP14866 589 aaKnown RBP eCLIP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 NTSR1P30989 418 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 HOXD12P35452 270 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 KIR2DL1P43626 348 aaPredicted RBP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 DUOXA1Q1HG43 343 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 ATL3Q6DD88 541 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 UNC13DQ70J99 1090 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 EPM2AIP1Q7L775 607 aaPredicted RBP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 BBS7Q8IWZ6 715 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 CHPFQ8IZ52 775 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 DEFB119Q8N690 84 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 FRMD1Q8N878 549 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 TERB1Q8NA31 727 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 SPRYD3Q8NCJ5 442 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 LINC00301Q8NCQ3 95 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 GOLGA5Q8TBA6 731 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 DNAI2Q9GZS0 605 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 FBXO44Q9H4M3 255 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 SLC39A2Q9NP94 309 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 TLR8Q9NR97 1041 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 KRT82Q9NSB4 513 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 DNAJC17Q9NVM6 304 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 COMMD8Q9NX08 183 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 FAM13BQ9NYF5 915 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 GMIPQ9P107 970 aa16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 TFIP11Q9UBB9 837 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 TPRP12270 2363 aaKnown RBP16.49■□□□□ 0.23
SBDSP1-201ENST00000415772 NUP205Q92621 2012 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 SDK1Q7Z5N4 2213 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 A0A0A0MRY4 1105 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 NEDD8-MDP1E9PL57 170 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 HOXC11O43248 304 aaPredicted RBP16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 OPHN1O60890 802 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 NDUFS2O75306 463 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 ZNF217O75362 1048 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 ITPKAP23677 461 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 HOXD13P35453 343 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 TUBP50607 506 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 CDH8P55286 799 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 SIM1P81133 766 aaPredicted RBP16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 MESP2Q0VG99 397 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 NCOA4Q13772 614 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 E2F4Q16254 413 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 SLC23A3Q6PIS1 610 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 RGL4Q8IZJ4 473 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 SCAMP5Q8TAC9 235 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 C7orf25Q9BPX7 421 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 BLZF1Q9H2G9 400 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 TMEM74BQ9NUR3 256 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 TMEM30AQ9NV96 361 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 MBD1Q9UIS9 605 aaPredicted RBP16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 NME7Q9Y5B8 376 aa16.48■□□□□ 0.23
SBDSP1-201ENST00000415772 PTPRDP23468 1912 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 POLR2DO15514 142 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 TLR5O60602 858 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 ADAM23O75077 832 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 SYPP08247 313 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 ZSCAN22P10073 491 aaPredicted RBP16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 MAP7D1Q3KQU3 841 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 ACOT1Q86TX2 421 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 CEP57L1Q8IYX8 460 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 ZCCHC14Q8WYQ9 949 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 ZNF516Q92618 1163 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 BBS2Q9BXC9 721 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 CALCOCO1Q9P1Z2 691 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 WDR35Q9P2L0 1181 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 RALYQ9UKM9 306 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 MAP1BP46821 2468 aaKnown RBP16.47■□□□□ 0.23
SBDSP1-201ENST00000415772 YEATS4O95619 227 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 SERPINF2P08697 491 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 GABRG2P18507 467 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 ATP5C1P36542 298 aaKnown RBP16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 AFMP43652 599 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 CASP4P49662 377 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 MAP3K7CLP57077 242 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 ZNF33AQ06730 810 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 KNOP1Q1ED39 458 aaKnown RBP16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 SYCP2LQ5T4T6 812 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 TPGS1Q6ZTW0 290 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 TMEM25Q86YD3 366 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 JAKMIP2Q96AA8 810 aa16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 ZFRQ96KR1 1074 aaKnown RBP16.46■□□□□ 0.23
SBDSP1-201ENST00000415772 IMPG2Q9BZV3 1241 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms