RNA–Protein interactions for RNA: ENST00000412413.1

AC004009.1-201, humanhuman

TSL 5 BASIC

Gene AC004009.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.1-201ENST00000412413 TMEM9BQ9NQ34 198 aa8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 ARHGEF4Q9NR80 690 aa8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 EHD2Q9NZN4 543 aa8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 TFIP11Q9UBB9 837 aaKnown RBP8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 EBF1Q9UH73 591 aa8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 CHORDC1Q9UHD1 332 aaPredicted RBP8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 MMP17Q9ULZ9 603 aa8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 CACNA1GO43497 2377 aa8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 ATXN2Q99700 1313 aaKnown RBP8.73□□□□□ -1.01
AC004009.1-201ENST00000412413 TCRBV21S2A2A0A5A6 115 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 FRMD3A2A2Y4 597 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 TBC1D3BA6NDS4 549 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 C1QTNF9BB2RNN3 333 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SGK1O00141 431 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SLC9A3R1O14745 358 aaPredicted RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 KIAA0391O15091 583 aaKnown RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 KAT7O95251 611 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 TOP3BO95985 862 aaKnown RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 ADH1CP00326 375 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 CFIP05156 583 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 C1QTNF9P0C862 333 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 HNRNPLP14866 589 aaKnown RBP eCLIP8.72□□□□□ -1.011e-8■■■■■ 35.1
AC004009.1-201ENST00000412413 YWHAQP27348 245 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 CASP1P29466 404 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 MYL6P60660 151 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SLC7A9P82251 487 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 CUL4AQ13619 759 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SLC39A14Q15043 492 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 NR6A1Q15406 480 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 CRY1Q16526 586 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SNRNP35Q16560 246 aaKnown RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 ANO4Q32M45 955 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 FAM26FQ5R3K3 315 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 LY6G5CQ5SRR4 150 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 BTBD8Q5XKL5 378 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 RHBDF2Q6PJF5 856 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 C11orf74Q86VG3 221 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 C12orf40Q86WS4 652 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 ADGRG2Q8IZP9 1017 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 DEFB124Q8NES8 71 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 JAKMIP2Q96AA8 810 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SPACA7Q96KW9 195 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 CNOT6LQ96LI5 555 aaKnown RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 C8orf48Q96LL4 319 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 CGRRF1Q99675 332 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 GTPBP2Q9BX10 602 aaKnown RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 B3GNT5Q9BYG0 378 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 LRRC27Q9C0I9 530 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 BLZF1Q9H2G9 400 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SMYD3Q9H7B4 428 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 KIAA1586Q9HCI6 787 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 POLMQ9NP87 494 aaPredicted RBP8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 FSCN3Q9NQT6 498 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 AGPAT3Q9NRZ7 376 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 MTMR6Q9Y217 621 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SH3BP1Q9Y3L3 701 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 NME7Q9Y5B8 376 aa8.72□□□□□ -1.01
AC004009.1-201ENST00000412413 SCN1AP35498 2009 aa8.71□□□□□ -1.01
AC004009.1-201ENST00000412413 SPTLC2O15270 562 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 COCHO43405 550 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 EXOC3O60645 756 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 HOXD13P35453 343 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 GRIA2P42262 883 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 PTGER3P43115 390 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 PPP3CCP48454 512 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 CASP4P49662 377 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 CDH8P55286 799 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 MRPS21P82921 87 aaKnown RBP8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 AMPD3Q01432 767 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 CYP24A1Q07973 514 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 ORC1Q13415 861 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 PSMD6Q15008 389 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 GAB4Q2WGN9 574 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 TRIM61Q5EBN2 209 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 EOGTQ5NDL2 527 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 RASSF3Q86WH2 238 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 NUP93Q8N1F7 819 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 IL17RCQ8NAC3 791 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 XXYLT1Q8NBI6 393 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 B3GALNT2Q8NCR0 500 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 SCAMP5Q8TAC9 235 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 WHAMMQ8TF30 809 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 KCNK16Q96T55 309 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 TTLL2Q9BWV7 592 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 NUSAP1Q9BXS6 441 aaKnown RBP8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 TRIM9Q9C026 710 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 ELOVL4Q9GZR5 314 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 TNMDQ9H2S6 317 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 CCSER2Q9H7U1 834 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.71□□□□□ -1.022e-15■■■■■ 372.6
AC004009.1-201ENST00000412413 TMEM30AQ9NV96 361 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 GMIPQ9P107 970 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 USP24Q9UPU5 2620 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 ATP8B3O60423 1300 aa8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 KMT2BQ9UMN6 2715 aaPredicted RBP8.71□□□□□ -1.02
AC004009.1-201ENST00000412413 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
AC004009.1-201ENST00000412413 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.7□□□□□ -1.02
AC004009.1-201ENST00000412413 TRIM24O15164 1050 aa8.7□□□□□ -1.02
AC004009.1-201ENST00000412413 TGFB1I1O43294 461 aa8.7□□□□□ -1.02
AC004009.1-201ENST00000412413 TACC1O75410 805 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms