RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TMEM25Q86YD3 366 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 BBS7Q8IWZ6 715 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 ETFBKMTQ8IXQ9 262 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 HDDC3Q8N4P3 179 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 ZFRQ96KR1 1074 aaKnown RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 GTPBP2Q9BX10 602 aaKnown RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 XYLT2Q9H1B5 865 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 CCSER2Q9H7U1 834 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 DMAP1Q9NPF5 467 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 SPHK2Q9NRA0 654 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 SLC6A14Q9UN76 642 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 ABCA7Q8IZY2 2146 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 ATXN2Q99700 1313 aaKnown RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 SPTLC2O15270 562 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 EXOC3O60645 756 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 HOXB2P14652 356 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 NTSR1P30989 418 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 RDXP35241 583 aaKnown RBP17.71■□□□□ 0.43
MRPL55-220ENST00000411464 SLC5A3P53794 718 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 CDH8P55286 799 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 BIRC3Q13489 604 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 CNNM4Q6P4Q7 775 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 RABEPKQ7Z6M1 372 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 FAM35AQ86V20 835 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 DEFB119Q8N690 84 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 LINC00301Q8NCQ3 95 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 SCFD1Q8WVM8 642 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 DUSP9Q99956 384 aaKnown RBP17.71■□□□□ 0.43
MRPL55-220ENST00000411464 TMEM121BQ9BXQ6 578 aaPredicted RBP17.71■□□□□ 0.43
MRPL55-220ENST00000411464 COMMD8Q9NX08 183 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 CGNQ9P2M7 1197 aaKnown RBP17.71■□□□□ 0.43
MRPL55-220ENST00000411464 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
MRPL55-220ENST00000411464 UBE4BO95155 1302 aa17.71■□□□□ 0.42
MRPL55-220ENST00000411464 SERPINF2P08697 491 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 IRF1P10914 325 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 GABRG2P18507 467 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 SIM1P81133 766 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-220ENST00000411464 ZNF33AQ06730 810 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 SEMA3BQ13214 749 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 ZNF699Q32M78 642 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 ZNF667Q5HYK9 610 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 PEAR1Q5VY43 1037 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-220ENST00000411464 GRAMD4Q6IC98 578 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 KIAA1211LQ6NV74 962 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 TERB1Q8NA31 727 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 GATA6Q92908 595 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 C7orf25Q9BPX7 421 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 SMYD3Q9H7B4 428 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 IL37Q9NZH6 218 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 GMIPQ9P107 970 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 NEUROG3Q9Y4Z2 214 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 ZZEF1O43149 2961 aa17.7■□□□□ 0.42
MRPL55-220ENST00000411464 SPAARA0A1B0GVQ0 90 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 UPK3BL1B0FP48 263 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 UPK3BL2E5RIL1 263 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 HYAL3O43820 417 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-220ENST00000411464 PPP6R2O75170 966 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 ZNF217O75362 1048 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 AP1G2O75843 785 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 ZDHHC11BP0C7U3 371 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 WASP42768 502 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 AP3M2P53677 418 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 NCOA4Q13772 614 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 PAQR9Q6ZVX9 377 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 UNC13DQ70J99 1090 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 CHPFQ8IZ52 775 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 INTS4Q96HW7 963 aaKnown RBP17.69■□□□□ 0.42
MRPL55-220ENST00000411464 XPO6Q96QU8 1125 aaKnown RBP17.69■□□□□ 0.42
MRPL55-220ENST00000411464 GZF1Q9H116 711 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-220ENST00000411464 FBXO44Q9H4M3 255 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 VRTNQ9H8Y1 702 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 FSCN3Q9NQT6 498 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 DNAJC17Q9NVM6 304 aaKnown RBP17.69■□□□□ 0.42
MRPL55-220ENST00000411464 CALCOCO1Q9P1Z2 691 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 TFIP11Q9UBB9 837 aaKnown RBP17.69■□□□□ 0.42
MRPL55-220ENST00000411464 STARD13Q9Y3M8 1113 aa17.69■□□□□ 0.42
MRPL55-220ENST00000411464 FAM92AA1XBS5 289 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 TRIM24O15164 1050 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 STX6O43752 255 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 TLR5O60602 858 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 OPHN1O60890 802 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 P4HA1P13674 534 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 CASP4P49662 377 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 GOLGA8FQ08AF8 430 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 GOLGA8DPQ0D2H9 430 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 KNOP1Q1ED39 458 aaKnown RBP17.68■□□□□ 0.42
MRPL55-220ENST00000411464 SCARA5Q6ZMJ2 495 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 HTR3DQ70Z44 454 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 PIP4P1Q86T03 277 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 ACOT1Q86TX2 421 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 C12orf56Q8IXR9 622 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 ZNF396Q96N95 335 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-220ENST00000411464 MAGEF1Q9HAY2 307 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 SLC39A2Q9NP94 309 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 TLR8Q9NR97 1041 aaKnown RBP17.68■□□□□ 0.42
MRPL55-220ENST00000411464 KRT82Q9NSB4 513 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 WDR35Q9P2L0 1181 aa17.68■□□□□ 0.42
MRPL55-220ENST00000411464 MSRB2Q9Y3D2 182 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms