RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 ACOX1Q15067 660 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 SLC4A8Q2Y0W8 1093 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 CLEC4GQ6UXB4 293 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 PCGF5Q86SE9 256 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 DTX2Q86UW9 622 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 TMTC1Q8IUR5 882 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 ATRIPQ8WXE1 791 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 ASB12Q8WXK4 309 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 RILPL2Q969X0 211 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 SKA1Q96BD8 255 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 RSPRY1Q96DX4 576 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 TRAPPC9Q96Q05 1148 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 C17orf80Q9BSJ5 609 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 ZHX3Q9H4I2 956 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 TAF1DQ9H5J8 278 aaPredicted RBP4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 G6PC2Q9NQR9 355 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 NDUFAF4Q9P032 175 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 CNOT11Q9UKZ1 510 aaKnown RBP4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 USP22Q9UPT9 525 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 SLC27A6Q9Y2P4 619 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 TCAF1Q9Y4C2 921 aa4.66□□□□□ -1.66
RNU2-28P-201ENST00000410457 FER1L4A9Z1Z3 1794 aa4.65□□□□□ -1.66
RNU2-28P-201ENST00000410457 GXYLT2A0PJZ3 443 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ZAR1LA6NP61 321 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 CD19P15391 556 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 DDX6P26196 483 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 NTSR1P30989 418 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 AKT1P31749 480 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 AARSP49588 968 aaKnown RBP eCLIP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 VAMP2P63027 116 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ITIH3Q06033 890 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 RESTQ13127 1097 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 PRKD1Q15139 912 aaPredicted RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 BTBD16Q32M84 506 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 TEDDM1Q5T9Z0 273 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 DEPDC1Q5TB30 811 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 RETSATQ6NUM9 610 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ANKS1BQ7Z6G8 1248 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 CPOQ8IVL8 374 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 FSTL5Q8N475 847 aaPredicted RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 TTC9BQ8N6N2 239 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 AFG1LQ8WV93 481 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 SOCS4Q8WXH5 440 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 CPT1BQ92523 772 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 MYEOVQ96EZ4 313 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ZBTB45Q96K62 511 aaPredicted RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 SEC62Q99442 399 aaKnown RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 GPR20Q99678 358 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 PAAF1Q9BRP4 392 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ACTRT3Q9BYD9 372 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 TPSD1Q9BZJ3 242 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 VPS16Q9H269 839 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ZNF768Q9H5H4 540 aaKnown RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ELAC1Q9H777 363 aaKnown RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 ZNF703Q9H7S9 590 aaPredicted RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 RXFP3Q9NSD7 469 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 GGA3Q9NZ52 723 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 PI4KBQ9UBF8 816 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 DKK2Q9UBU2 259 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 STEAP1Q9UHE8 339 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 CNTN6Q9UQ52 1028 aa4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 DRG1Q9Y295 367 aaKnown RBP4.65□□□□□ -1.67
RNU2-28P-201ENST00000410457 KRTAP9-7A8MTY7 169 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 PROM1O43490 865 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 RPP40O75818 363 aaKnown RBP4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 LARGE1O95461 756 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 POLBP06746 335 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 PPP3CBP16298 524 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 XBP1P17861 261 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 CASP2P42575 452 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 SEC24CP53992 1094 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 GEMIN4P57678 1058 aaKnown RBP4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 NXPH1P58417 271 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 UBE3AQ05086 875 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 LMOD3Q0VAK6 560 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 SMAD1Q15797 465 aaKnown RBP4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 ST3GAL2Q16842 350 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 MAP3K21Q5TCX8 1036 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 SLC9A4Q6AI14 798 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 MSANTD2Q6P1R3 559 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 CLEC9AQ6UXN8 241 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 TRABD2AQ86V40 505 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 RAB11FIP4Q86YS3 637 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 SYNE4Q8N205 404 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 ESX1Q8N693 406 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 CPEB3Q8NE35 698 aaKnown RBP4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 ADAM2Q99965 735 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 GLOD4Q9HC38 313 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 UBN1Q9NPG3 1134 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 TERF2IPQ9NYB0 399 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 NKX1-2Q9UD57 310 aaPredicted RBP4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 SH2B3Q9UQQ2 575 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 MAP3K2Q9Y2U5 619 aa4.64□□□□□ -1.67
RNU2-28P-201ENST00000410457 CCDC196A0A1B0GTZ2 297 aa4.63□□□□□ -1.67
RNU2-28P-201ENST00000410457 TMEM200CA6NKL6 621 aa4.63□□□□□ -1.67
RNU2-28P-201ENST00000410457 A8MVJ9 347 aa4.63□□□□□ -1.67
RNU2-28P-201ENST00000410457 EXOC5O00471 708 aa4.63□□□□□ -1.67
RNU2-28P-201ENST00000410457 KIAA0355O15063 1070 aa4.63□□□□□ -1.67
RNU2-28P-201ENST00000410457 PPM1DO15297 605 aa4.63□□□□□ -1.67
RNU2-28P-201ENST00000410457 SLC16A3O15427 465 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms