RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 SPATA2LQ8IUW3 424 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SIX6OS1Q8N1H7 587 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 UXS1Q8NBZ7 420 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 ZNF596Q8TC21 504 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PRKD2Q9BZL6 878 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SLC22A4Q9H015 551 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 TOPORSQ9NS56 1045 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 IGSF5Q9NSI5 407 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SNTG1Q9NSN8 517 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 FBXO28Q9NVF7 368 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 UBA2Q9UBT2 640 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 C3orf18Q9UK00 162 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PCDHGB3Q9Y5G1 929 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SNX14Q9Y5W7 946 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SQORQ9Y6N5 450 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PTPRCP08575 1304 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 KDM2BQ8NHM5 1336 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 ZNF891A8MT65 544 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 ARHGEF33A8MVX0 844 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 H0YAE9 185 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 GMDSO60547 372 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 FOXD2O60548 495 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 OXSR1O95747 527 aaPredicted RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PROCP04070 461 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 CYP17A1P05093 508 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 CIITAP33076 1130 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 ARCN1P48444 511 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 NR2C2P49116 596 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SCN1BQ07699 218 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 KARSQ15046 597 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SEC23BQ15437 767 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 KLHL22Q53GT1 634 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SLC10A5Q5PT55 438 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 MPP7Q5T2T1 576 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SLC25A24Q6NUK1 477 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 XRRA1Q6P2D8 792 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 AFTPHQ6ULP2 937 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 GSTA5Q7RTV2 222 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 ZNF598Q86UK7 904 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 LILRB2Q8N423 598 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 FAM26EQ8N5C1 309 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 C1orf52Q8N6N3 182 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 POMGNT2Q8NAT1 580 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 OR8K1Q8NGG5 319 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 ETNPPLQ8TBG4 499 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 CEP170P1Q96L14 293 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 BEX2Q9BXY8 128 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 KCND1Q9NSA2 647 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 RIC8BQ9NVN3 520 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PPP1R14DQ9NXH3 145 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 SNTG2Q9NY99 539 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 KIAA1257Q9ULG3 409 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PHF24Q9UPV7 400 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 UTP11Q9Y3A2 253 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 RTCBQ9Y3I0 505 aaKnown RBP5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 PCDHGC5Q9Y5F6 944 aa5.41□□□□□ -1.54
R3HDM1-204ENST00000410054 TRAV6A0A075B6T7 132 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 HEATR9A2RTY3 570 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 TMEM114B3SHH9 223 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 SHOXO15266 292 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 CST8O60676 142 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 LILRB3O75022 631 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 RBMXL2O75526 392 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 PALMO75781 387 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 OR7A10O76100 309 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 GCNT3O95395 438 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 GLAP06280 429 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 CHRNB1P11230 501 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ATP1A3P13637 1013 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 HPGDP15428 266 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 PLCG1P19174 1290 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 PDCP20941 246 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ARFIP1P53367 373 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 NAA20P61599 178 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 FANCCQ00597 558 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 TEFQ10587 303 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 AMZ1Q400G9 498 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 METTL21CQ5VZV1 264 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 RAP1GAP2Q684P5 730 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ATL3Q6DD88 541 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 NT5DC3Q86UY8 548 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 FAM228AQ86W67 206 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ZBTB44Q8NCP5 570 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 DEPDC1BQ8WUY9 529 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 HERVK_113Q902F9 699 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ELF4Q99607 663 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 STK33Q9BYT3 514 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 MLXIPLQ9NP71 852 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ENTPD7Q9NQZ7 604 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 SH2B1Q9NRF2 756 aaPredicted RBP5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 ADAMTS1Q9UHI8 967 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 MYPNQ86TC9 1320 aa5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 RRBP1Q9P2E9 1410 aaKnown RBP5.4□□□□□ -1.54
R3HDM1-204ENST00000410054 hCG_1807616A0A1W2PRN6 198 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 K7ERQ8 282 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 DYNC1LI2O43237 492 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 GADD45BO75293 160 aaPredicted RBP5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 USP12O75317 370 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 PMPCBO75439 489 aa5.4□□□□□ -1.55
R3HDM1-204ENST00000410054 CABYRO75952 493 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms