RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MMRN1Q13201 1228 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 AGKQ53H12 422 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 CYP4A22Q5TCH4 519 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 ARMCX6Q7L4S7 300 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 LDHDQ86WU2 507 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 ZFAND2BQ8WV99 257 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 CEP44Q9C0F1 390 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 STN1Q9H668 368 aaKnown RBP18.24■□□□□ 0.51
SMPD4-202ENST00000409031 ANKEF1Q9NU02 776 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 ARL8BQ9NVJ2 186 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 CROTQ9UKG9 612 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 NOD1Q9Y239 953 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 TCHHQ07283 1943 aa18.24■□□□□ 0.51
SMPD4-202ENST00000409031 MYO1GB0I1T2 1018 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 SERPINA6P08185 405 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 NR1D2Q14995 579 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 ERO1BQ86YB8 467 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 OSCP1Q8WVF1 389 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 MAGEC1O60732 1142 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 GJA8P48165 433 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 PSEN1P49768 467 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 CACNB3P54284 484 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 FOXD4Q12950 439 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 NME3Q13232 169 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 XKR3Q5GH77 459 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 ARMCX4Q5H9R4 360 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 KCNT1Q5JUK3 1230 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 ISLR2Q6UXK2 745 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 KATNAL2Q8IYT4 538 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 RNF148Q8N7C7 305 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 ZBED2Q9BTP6 218 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 BDH2Q9BUT1 245 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 NEUROG2Q9H2A3 272 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 LRRC40Q9H9A6 602 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 SUGT1Q9Y2Z0 365 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 TRIM24O15164 1050 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 TRMUO75648 421 aaKnown RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 CHKAP35790 457 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 HSD17B4P51659 736 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 MGAT5Q09328 741 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 FAM98CQ17RN3 349 aaKnown RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 NAPEPLDQ6IQ20 393 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 C6orf89Q6UWU4 347 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 TAS1R2Q8TE23 839 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 FHDC1Q9C0D6 1143 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 SLC13A4Q9UKG4 626 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 TSPOAP1O95153 1857 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 FSCN2O14926 492 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 HUS1O60921 280 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 JAK1P23458 1154 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 POLD1P28340 1107 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 TSTA3Q13630 321 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 NDUFA5Q16718 116 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 SAMD4BQ5PRF9 694 aaKnown RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 FAM43BQ6ZT52 329 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 BEST2Q8NFU1 509 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 TFB1MQ8WVM0 346 aaKnown RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 POP1Q99575 1024 aaKnown RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 FBXO6Q9NRD1 293 aaPredicted RBP18.23■□□□□ 0.51
SMPD4-202ENST00000409031 PNPLA3Q9NST1 481 aa18.23■□□□□ 0.51
SMPD4-202ENST00000409031 UBDO15205 165 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 MED26O95402 600 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 LSM8O95777 96 aaKnown RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 BST1Q10588 318 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 STXBP2Q15833 593 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 ARHGEF19Q8IW93 802 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 GJA3Q9Y6H8 435 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 UBA6A0AVT1 1052 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 E5RI56 91 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 MATN2O00339 956 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 SNX17Q15036 470 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 NRF1Q16656 503 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 AGAP9Q5VTM2 703 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 SGF29Q96ES7 293 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 NDUFB10O96000 172 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 RAB27AP51159 221 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 PPP4CP60510 307 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 KRT72Q14CN4 511 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 MFSD7Q6UXD7 560 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 LNX1Q8TBB1 728 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 PPP1R2P1Q96PQ5 205 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 ZNF341Q9BYN7 854 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 RGS5O15539 181 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 PRPF4O43172 522 aaKnown RBP eCLIP18.22■□□□□ 0.511e-6■□□□□ 8.5
SMPD4-202ENST00000409031 CSTF3Q12996 717 aaKnown RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 KCTD2Q14681 263 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 HGSNATQ68CP4 663 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 ARCQ7LC44 396 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 ABRAQ8N0Z2 381 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 SREK1IP1Q8N9Q2 155 aaPredicted RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 LRRC39Q96DD0 335 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 OSBPL11Q9BXB4 747 aa18.22■□□□□ 0.51
SMPD4-202ENST00000409031 DRG1Q9Y295 367 aaKnown RBP18.22■□□□□ 0.51
SMPD4-202ENST00000409031 TM7SF2O76062 418 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 VCLP18206 1134 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 CASP7P55210 303 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 MAPK11Q15759 364 aa18.21■□□□□ 0.51
SMPD4-202ENST00000409031 KHDC1Q4VXA5 237 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms