RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 PDE6CP51160 858 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 KPNA1P52294 538 aaPredicted RBP17.41■□□□□ 0.38
CGREF1-205ENST00000404694 MAP3K7CLP57077 242 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 ZBED6P86452 979 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 TNK2Q07912 1038 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 USP4Q13107 963 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 ZNF77Q15935 545 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 TSR1Q2NL82 804 aaKnown RBP17.41■□□□□ 0.38
CGREF1-205ENST00000404694 ZNF394Q53GI3 561 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 CLEC20AQ6ZU45 233 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 ZNF687Q8N1G0 1237 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 TTC39CQ8N584 583 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 EHBP1Q8NDI1 1231 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 SCAMP5Q8TAC9 235 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 FAM3CQ92520 227 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 CYFIP2Q96F07 1278 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 MSANTD3Q96H12 275 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 FAM81BQ96LP2 452 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 FAM83CQ9BQN1 747 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 FAM124BQ9H5Z6 455 aaPredicted RBP17.41■□□□□ 0.38
CGREF1-205ENST00000404694 C8orf33Q9H7E9 229 aaPredicted RBP17.41■□□□□ 0.38
CGREF1-205ENST00000404694 GKN1Q9NS71 199 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 IL37Q9NZH6 218 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 MYO6Q9UM54 1294 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 NDRG2Q9UN36 371 aaKnown RBP17.41■□□□□ 0.38
CGREF1-205ENST00000404694 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.41■□□□□ 0.38
CGREF1-205ENST00000404694 USP34Q70CQ2 3546 aa17.41■□□□□ 0.38
CGREF1-205ENST00000404694 OLFM2O95897 454 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 OAS1P00973 400 aaKnown RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CASP14P31944 242 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 FZD5Q13467 585 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CUL2Q13617 745 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 MTF1Q14872 753 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 TC2NQ8N9U0 490 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 PDZD8Q8NEN9 1154 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 OR8K1Q8NGG5 319 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 TTC8Q8TAM2 541 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 OVCA2Q8WZ82 227 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 ATOH1Q92858 354 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 FBXO32Q969P5 355 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CLDN23Q96B33 292 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 PHOX2BQ99453 314 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 LSM14BQ9BX40 385 aaKnown RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 NAA15Q9BXJ9 866 aaKnown RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 DNAI2Q9GZS0 605 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 FAM207AQ9NSI2 230 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 ARHGAP26Q9UNA1 814 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 DMDP11532 3685 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 FAM92AA1XBS5 289 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 SPECC1L-ADORA2AF8WAN1 911 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 NCAM2O15394 837 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 ABL1P00519 1130 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 TCF3P15923 654 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CTHP32929 405 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 KRT9P35527 623 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 MAGEA9P43362 315 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 RPS9P46781 194 aaKnown RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 RAD23BP54727 409 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 ITPRIPL2Q3MIP1 535 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 PPP1R26Q5T8A7 1209 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CC2D1AQ6P1N0 951 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 C1orf228Q6PIY5 440 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 TRIM65Q6PJ69 517 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CACNA2D4Q7Z3S7 1137 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 RALGPS2Q86X27 583 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 C1orf210Q8IVY1 113 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 SLC4A11Q8NBS3 891 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 TTC16Q8NEE8 873 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 SH3RF2Q8TEC5 729 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 SYN2Q92777 582 aaPredicted RBP17.4■□□□□ 0.38
CGREF1-205ENST00000404694 DNAJC7Q99615 494 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 CRACR2AQ9BSW2 395 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 HPS4Q9NQG7 708 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 COMMD8Q9NX08 183 aa17.4■□□□□ 0.38
CGREF1-205ENST00000404694 HHLA1C9JL84 531 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 FECHP22830 423 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 SLC7A9P82251 487 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 ZXDBP98169 803 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 LRMPQ12912 555 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 RUNX3Q13761 415 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 KLHDC7AQ5VTJ3 777 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 TXNDC11Q6PKC3 985 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 GPRIN1Q7Z2K8 1008 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 LMO3Q8TAP4 145 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 TMEM176AQ96HP8 235 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 HEXIM2Q96MH2 286 aaKnown RBP17.39■□□□□ 0.37
CGREF1-205ENST00000404694 RNF38Q9H0F5 515 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 INTS2Q9H0H0 1204 aaKnown RBP17.39■□□□□ 0.37
CGREF1-205ENST00000404694 GANQ9H2C0 597 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 EBF3Q9H4W6 596 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 PNPLA8Q9NP80 782 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 GMIPQ9P107 970 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 APEX2Q9UBZ4 518 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 CACNA1IQ9P0X4 2223 aa17.39■□□□□ 0.37
CGREF1-205ENST00000404694 OTOL1A6NHN0 477 aaPredicted RBP17.38■□□□□ 0.37
CGREF1-205ENST00000404694 ARSAP15289 507 aa17.38■□□□□ 0.37
CGREF1-205ENST00000404694 UCHL3P15374 230 aa17.38■□□□□ 0.37
CGREF1-205ENST00000404694 SLC9A1P19634 815 aa17.38■□□□□ 0.37
CGREF1-205ENST00000404694 TBXAS1P24557 533 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms