RNA–Protein interactions for RNA: ENST00000394114.2

CASC3-202, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 2,792 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-202ENST00000394114 RHOXF2BP0C7M4 288 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CTAGE8P0CG41 777 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 LPOP22079 712 aaPredicted RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 ANXA13P27216 316 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CDR1P51861 262 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 AP3M2P53677 418 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 PTPN11Q06124 597 aaPredicted RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 ENPEPQ07075 957 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 KCTD19Q17RG1 926 aaPredicted RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 SGSM1Q2NKQ1 1148 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 INAVAQ3KP66 663 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 NAA35Q5VZE5 725 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 SLC27A1Q6PCB7 646 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CTAGE6Q86UF2 777 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 SESTD1Q86VW0 696 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CPNE8Q86YQ8 564 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CTAGE4Q8IX94 777 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 GSTCDQ8NEC7 633 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 PPHLN1Q8NEY8 458 aaKnown RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 ZNF653Q96CK0 615 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CYFIP2Q96F07 1278 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 BTBD6Q96KE9 485 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 ZMAT2Q96NC0 199 aaKnown RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 RHOXF2Q9BQY4 288 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CCDC94Q9BW85 323 aaPredicted RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 XYLT2Q9H1B5 865 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 SMYD3Q9H7B4 428 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 ZNF395Q9H8N7 513 aaPredicted RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 CISHQ9NSE2 258 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 GMIPQ9P107 970 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 AGAP1Q9UPQ3 857 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 NOC2LQ9Y3T9 749 aaKnown RBP6.21□□□□□ -1.42
CASC3-202ENST00000394114 PCDHGC5Q9Y5F6 944 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 CEP290O15078 2479 aa6.21□□□□□ -1.42
CASC3-202ENST00000394114 EFCAB8A8MWE9 144 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 KCNK3O14649 394 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 PPEF2O14830 753 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 RTN2O75298 545 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 RECQL4O94761 1208 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TMEM253P0C7T8 217 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 GNAT1P11488 350 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 CD19P15391 556 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 NME1P15531 152 aaKnown RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 TBXAS1P24557 533 aaPredicted RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 ASPAP45381 313 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 PPP2R2AP63151 447 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 C2orf54Q08AI8 447 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 WHAMMP3Q1A5X7 153 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 ZNF667Q5HYK9 610 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TMEM240Q5SV17 173 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TWF2Q6IBS0 349 aaKnown RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 THSD4Q6ZMP0 1018 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 PEX26Q7Z412 305 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 CEP112Q8N8E3 955 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 CCDC89Q8N998 374 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TMEM102Q8N9M5 508 aaPredicted RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 CXorf38Q8TB03 319 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 GRIN3AQ8TCU5 1115 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 RFFLQ8WZ73 363 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 GOLGA1Q92805 767 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 C18orf25Q96B23 403 aaPredicted RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 FUBP3Q96I24 572 aaKnown RBP eCLIP6.2□□□□□ -1.42
CASC3-202ENST00000394114 MPP4Q96JB8 637 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 HHIPQ96QV1 700 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 PLEKHA4Q9H4M7 779 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 DPP3Q9NY33 737 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TUBGCP4Q9UGJ1 667 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 HMGXB4Q9UGU5 601 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 PCDHB2Q9Y5E7 798 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 CDY2AQ9Y6F7 541 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 GRIN2DO15399 1336 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TNFRSF10CO14798 259 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 PRKD3O94806 890 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 HMGCRP04035 888 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 FGFR1P11362 822 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 THPOP40225 353 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 ZNF143P52747 638 aaPredicted RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 RELBQ01201 579 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 SV2CQ496J9 727 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 OVOS1Q6IE37 1185 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 FBXO38Q6PIJ6 1188 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 C1orf228Q6PIY5 440 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 MMS22LQ6ZRQ5 1243 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 FGD2Q7Z6J4 655 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 FAM228AQ86W67 206 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 CREG2Q8IUH2 290 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 LRRC57Q8N9N7 239 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 NXPE3Q969Y0 559 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 SKA1Q96BD8 255 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 HPDLQ96IR7 371 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 C11orf70Q9BRQ4 267 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 CELF4Q9BZC1 486 aaKnown RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 SDCBP2Q9H190 292 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 ISCUQ9H1K1 167 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 GOLGA2P5Q9HBQ8 144 aa6.2□□□□□ -1.42
CASC3-202ENST00000394114 TRMT13Q9NUP7 481 aaKnown RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 DDX20Q9UHI6 824 aaKnown RBP6.2□□□□□ -1.42
CASC3-202ENST00000394114 OPA1O60313 960 aa6.19□□□□□ -1.42
CASC3-202ENST00000394114 SNUPNO95149 360 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms