RNA–Protein interactions for RNA: ENST00000393150.7

CASP4-201, Transcript of caspase 4, humanhuman

TSL 1 (best) BASIC

Gene CASP4, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-201ENST00000393150 ALKAL1Q6UXT8 129 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 CHSY3Q70JA7 882 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 FBXL16Q8N461 479 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 ATAD1Q8NBU5 361 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 LSM14AQ8ND56 463 aaKnown RBP8.5□□□□□ -1.05
CASP4-201ENST00000393150 BEST2Q8NFU1 509 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 NUDT8Q8WV74 236 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 LRRC3BQ96PB8 259 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 SLC46A2Q9BY10 475 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 LRRC3Q9BY71 257 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 ZDHHC5Q9C0B5 715 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 FAM124BQ9H5Z6 455 aaPredicted RBP8.5□□□□□ -1.05
CASP4-201ENST00000393150 PLEKHA5Q9HAU0 1116 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 SOX13Q9UN79 622 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 ATG2BQ96BY7 2078 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 VWA8A3KMH1 1905 aa8.5□□□□□ -1.05
CASP4-201ENST00000393150 NID2Q14112 1375 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 LAMA1P25391 3075 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 IGSF10Q6WRI0 2623 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 THADAQ6YHU6 1953 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 TRAV19A0A0A6YYK7 116 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 SCAMP3O14828 347 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 NEMFO60524 1076 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 NDUFS2O75306 463 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 SMNDC1O75940 238 aaKnown RBP eCLIP8.49□□□□□ -1.05
CASP4-201ENST00000393150 PRAMEF12O95522 483 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 CKMP06732 381 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 FTH1P19P0C7X4 201 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 CSH1P0DML2 217 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 CSH2P0DML3 217 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 TYMPP19971 482 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 PDIA3P30101 505 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 HOXC13P31276 330 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 ABCG1P45844 678 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 ZNF268Q14587 947 aaPredicted RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 MTF1Q14872 753 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 SUZ12Q15022 739 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 CRY1Q16526 586 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 ADCK5Q3MIX3 580 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 XKR4Q5GH76 650 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 HAUS3Q68CZ6 603 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 SDE2Q6IQ49 451 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 MPZL3Q6UWV2 235 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 C8orf86Q6ZUL3 223 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 TRMT11Q7Z4G4 463 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 VN1R5Q7Z5H4 357 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 MON1AQ86VX9 555 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 DCP1BQ8IZD4 617 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 MINDY1Q8N5J2 469 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 SPPL2BQ8TCT7 592 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 SETD7Q8WTS6 366 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 OSCP1Q8WVF1 389 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 CHFRQ96EP1 664 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 TSPAN18Q96SJ8 248 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 NCOA5Q9HCD5 579 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 HPS4Q9NQG7 708 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 PILRBQ9UKJ0 227 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 MMP17Q9ULZ9 603 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 UBQLN1Q9UMX0 589 aaKnown RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 KCNJ14Q9UNX9 436 aa8.49□□□□□ -1.05
CASP4-201ENST00000393150 TIMM13Q9Y5L4 95 aaPredicted RBP8.49□□□□□ -1.05
CASP4-201ENST00000393150 NUP205Q92621 2012 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 NCANO14594 1321 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 MTMR11A4FU01 709 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 M0QZQ0 153 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 SLC9A3R1O14745 358 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 CLDN3O15551 220 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 RRP8O43159 456 aaKnown RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 SH3BP5O60239 455 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 ZNF217O75362 1048 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 RGS9O75916 674 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 APODP05090 189 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 OR4Q2P0C623 313 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 ARSAP15289 507 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 CYP3A5P20815 502 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 RPS6KB1P23443 525 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 U2AF2P26368 475 aaKnown RBP eCLIP8.48□□□□□ -1.05
CASP4-201ENST00000393150 KRT2P35908 639 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 P2RY2P41231 377 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 ST13P50502 369 aaKnown RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 FAM160A1Q05DH4 1040 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 PPP2R3AQ06190 1150 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 SOX4Q06945 474 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 TRIM29Q14134 588 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 KCNB1Q14721 858 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 PLEKHG6Q3KR16 790 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 WDR45BQ5MNZ6 344 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 NT5DC1Q5TFE4 455 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 ZNF385CQ66K41 422 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 RASSF3Q86WH2 238 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 CCDC33Q8N5R6 958 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 MDM1Q8TC05 714 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 USP33Q8TEY7 942 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 HMGB4Q8WW32 186 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 USP13Q92995 863 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 C18orf25Q96B23 403 aaPredicted RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 CDC6Q99741 560 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 ACO2Q99798 780 aaKnown RBP8.48□□□□□ -1.05
CASP4-201ENST00000393150 CCDC113Q9H0I3 377 aa8.48□□□□□ -1.05
CASP4-201ENST00000393150 CDT1Q9H211 546 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms