RNA–Protein interactions for RNA: ENST00000381565.2

APOBEC3F-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3F, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-202ENST00000381565 TXNDC11Q6PKC3 985 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 RRAGAQ7L523 313 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 YAF2Q8IY57 180 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 PDZD8Q8NEN9 1154 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TFAP2BQ92481 460 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 RUBCNQ92622 972 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 SHDQ96IW2 340 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZFRQ96KR1 1074 aaKnown RBP12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 CCSER2Q9H7U1 834 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 SAMSN1Q9NSI8 373 aaKnown RBP12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 COMMD8Q9NX08 183 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 OSER1Q9NX31 292 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TMEM63CQ9P1W3 806 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 DACH1Q9UI36 760 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TSPAN16Q9UKR8 245 aa12.19□□□□□ -0.46
APOBEC3F-202ENST00000381565 TULP2O00295 520 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 O00370 1275 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 ARSAP15289 507 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 HDCP19113 662 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 SLC9A1P19634 815 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 KIF11P52732 1056 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 YWHAEP62258 255 aaKnown RBP12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 CETN1Q12798 172 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 PUM1Q14671 1186 aaKnown RBP eCLIP12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 UBXN2BQ14CS0 331 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 PKDCCQ504Y2 493 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 SGO2Q562F6 1265 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 CCDC183Q5T5S1 534 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 GJB7Q6PEY0 223 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 TTC8Q8TAM2 541 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 SH3RF2Q8TEC5 729 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 NMUR1Q9HB89 426 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 SIX2Q9NPC8 291 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 CHORDC1Q9UHD1 332 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 AJAP1Q9UKB5 411 aaPredicted RBP12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 CNTN6Q9UQ52 1028 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 SCML2Q9UQR0 700 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 CPQQ9Y646 472 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 USP3Q9Y6I4 520 aa12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 MYO18AQ92614 2054 aaKnown RBP12.18□□□□□ -0.46
APOBEC3F-202ENST00000381565 GTPBP10A4D1E9 387 aaKnown RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 SPECC1L-ADORA2AF8WAN1 911 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 LEFTY2O00292 366 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 COCHO43405 550 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 ABL1P00519 1130 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 PAEPP09466 180 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CTHP32929 405 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 MTIF2P46199 727 aaKnown RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 TUBP50607 506 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 MLLT6P55198 1093 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 PDE4CQ08493 712 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 MAN2A1Q16706 1144 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 TPD52L1Q16890 204 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 EML3Q32P44 896 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CT47A1Q5JQC4 288 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CDKAL1Q5VV42 579 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 DPY19L2P1Q6NXN4 242 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZC3H14Q6PJT7 736 aaKnown RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZNF852Q6ZMS4 543 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 BHLHA9Q7RTU4 235 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CCDC186Q7Z3E2 898 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CREBRFQ8IUR6 639 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 RBBP8NLQ8NC74 664 aaPredicted RBP12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CSGALNACT1Q8TDX6 532 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 WBP2Q969T9 261 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 CLDN23Q96B33 292 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 OSBPL6Q9BZF3 934 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 FBXO44Q9H4M3 255 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 EBF3Q9H4W6 596 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 GKN1Q9NS71 199 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 SMPD4Q9NXE4 827 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 NFE2L3Q9Y4A8 694 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 PCDHB4Q9Y5E5 795 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 WNT6Q9Y6F9 365 aa12.17□□□□□ -0.46
APOBEC3F-202ENST00000381565 A0A1W2PQH9 124 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 FAM170BA6NMN3 283 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 BECN2A8MW95 431 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 KCNJ18B7U540 433 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 SCAMP3O14828 347 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 XPO1O14980 1071 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 TLR5O60602 858 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 MBL2P11226 248 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 VDRP11473 427 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 CD19P15391 556 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 BRD2P25440 801 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 PON1P27169 355 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 PDE6CP51160 858 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 BCAT1P54687 386 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 BST2Q10589 180 aaKnown RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 KCNJ12Q14500 433 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 STX1AQ16623 288 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 RSPO4Q2I0M5 234 aaPredicted RBP12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 ITPRIPL2Q3MIP1 535 aa12.16□□□□□ -0.46
APOBEC3F-202ENST00000381565 ZNF528Q3MIS6 628 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms