RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 CD48P09326 243 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 RARAP10276 462 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 NCAM1P13591 858 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 DESP17661 470 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 CA8P35219 290 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 MATKP42679 507 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 HDAC4P56524 1084 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 RBM10P98175 930 aaKnown RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 NME3Q13232 169 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PSMD5Q16401 504 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 NFE2Q16621 373 aaPredicted RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 MGAT5BQ3V5L5 792 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 SYPL2Q5VXT5 272 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC70Q6NSX1 233 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 FBXO38Q6PIJ6 1188 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 MFSD7Q6UXD7 560 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 ANKS3Q6ZW76 656 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 MMGT1Q8N4V1 131 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 FBXO22Q8NEZ5 403 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 EXD1Q8NHP7 514 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 EDEM1Q92611 657 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 SLITRK1Q96PX8 696 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 TBCBQ99426 244 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 SEPT5Q99719 369 aaPredicted RBP8.37□□□□□ -1.07
ERCC8-202ENST00000381118 CNGB3Q9NQW8 809 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 GPATCH2LQ9NWQ4 482 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 AMACRQ9UHK6 382 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 PCDHB5Q9Y5E4 795 aa8.37□□□□□ -1.07
ERCC8-202ENST00000381118 MTMR11A4FU01 709 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 ZSCAN5CA6NGD5 496 aaPredicted RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 OR6C75A6NL08 312 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 CCDC188H7C350 402 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 ADAM12O43184 909 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 SART1O43290 800 aaKnown RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 RAD51CO43502 376 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 FBXO21O94952 628 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 GJB5O95377 273 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 TRUB2O95900 331 aaKnown RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 KRT7P08729 469 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 OR1D2P34982 312 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 DYNLT1P63172 113 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 ADCY2Q08462 1091 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 SNX1Q13596 522 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 ACAP1Q15027 740 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 POLNQ7Z5Q5 900 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 FAM131BQ86XD5 332 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 CMTR2Q8IYT2 770 aaKnown RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 COLGALT1Q8NBJ5 622 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 KCTD6Q8NC69 237 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 UBE2Q2Q8WVN8 375 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 C1orf54Q8WWF1 131 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 AUTS2Q8WXX7 1259 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 RBM41Q96IZ5 413 aaKnown RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 CALN1Q9BXU9 219 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 OSBPL8Q9BZF1 889 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 CRISPLD1Q9H336 500 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 DDX56Q9NY93 547 aaKnown RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 DMGDHQ9UI17 866 aaKnown RBP8.36□□□□□ -1.07
ERCC8-202ENST00000381118 CEP290O15078 2479 aa8.36□□□□□ -1.07
ERCC8-202ENST00000381118 ESYT3A0FGR9 886 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 WDR27A2RRH5 827 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 H7C4K7 107 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 M0QYT0 321 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 DPYSL4O14531 572 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 DAB1O75553 588 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 HEXIM1O94992 359 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 LTFP02788 710 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SOD2P04179 222 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 FYNP06241 537 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 LAG3P18627 525 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PCK1P35558 622 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SCNN1AP37088 669 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PTPN9P43378 593 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CDH6P55285 790 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 VSNL1P62760 191 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 TUBB4BP68371 445 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 DUSP4Q13115 394 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 ZC3H12AQ5D1E8 599 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 TMEM240Q5SV17 173 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 LRRC38Q5VT99 294 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SPOCD1Q6ZMY3 1216 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CYP4V2Q6ZWL3 525 aaPredicted RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 GSPT2Q8IYD1 628 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 RCOR2Q8IZ40 523 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SLC39A11Q8N1S5 342 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 PRELID2Q8N945 189 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 SLC7A14Q8TBB6 771 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 ATG4AQ8WYN0 398 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 ANKRD7Q92527 254 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 HAUS1Q96CS2 278 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 FUBP3Q96I24 572 aaKnown RBP eCLIP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 DDX23Q9BUQ8 820 aaKnown RBP8.35□□□□□ -1.07
ERCC8-202ENST00000381118 MAGEB5Q9BZ81 275 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 CHST7Q9NS84 486 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 MTUS1Q9ULD2 1270 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 GBF1Q92538 1859 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 TRIM66O15016 1216 aa8.35□□□□□ -1.07
ERCC8-202ENST00000381118 TTI1O43156 1089 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms