RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 COPG1Q9Y678 874 aaKnown RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 TBC1D4O60343 1298 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 PCSK2P16519 638 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CXCR2P25025 360 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 PPP2R1BP30154 601 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 MAPK9P45984 424 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 NPY2RP49146 381 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 CLCN6P51797 869 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 PTK7Q13308 1070 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 USP33Q8TEY7 942 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 HEXDCQ8WVB3 486 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 SLC5A5Q92911 643 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 C18orf25Q96B23 403 aaPredicted RBP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 DNAJC7Q99615 494 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 SLC13A1Q9BZW2 595 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.41□□□□□ -1.22
CCDC171-201ENST00000380701 SPASTQ9UBP0 616 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 RPS6KB2Q9UBS0 482 aa7.41□□□□□ -1.22
CCDC171-201ENST00000380701 LRRIQ1Q96JM4 1722 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 OR6C75A6NL08 312 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 DDNO94850 711 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 OR56A5P0C7T3 313 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 MYBL2P10244 700 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 HPGDP15428 266 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 CYP11B1P15538 503 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 PRLRP16471 622 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 KELP23276 732 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 GRK2P25098 689 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 SLC7A5Q01650 507 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 MARC1Q5VT66 337 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 PLPPR4Q7Z2D5 763 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 AGAP3Q96P47 875 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 ZSWIM1Q9BR11 485 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 CCDC134Q9H6E4 229 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 INTS13Q9NVM9 706 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 SEPT3Q9UH03 358 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 ALG6Q9Y672 507 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 FRMPD4Q14CM0 1322 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 TRAV19A0A0A6YYK7 116 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 TMEM114B3SHH9 223 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 WNT10BO00744 389 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 VPS4BO75351 444 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 LAG3P18627 525 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 COMTP21964 271 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 MAGEA4P43358 317 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 PRIM2P49643 509 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 NR1I3Q14994 352 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 PPP1R15BQ5SWA1 713 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 ZNF720Q7Z2F6 126 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 CIPCQ9C0C6 399 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 SYBUQ9NX95 663 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 FBXL5Q9UKA1 691 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 MRPS17Q9Y2R5 130 aaKnown RBP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 SNUPNO95149 360 aaKnown RBP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 GLP2RO95838 553 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 HMGCRP04035 888 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 EIF2S1P05198 315 aaKnown RBP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 ZBTB48P10074 688 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 TCF3P15923 654 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 MSH3P20585 1137 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 EFEMP1Q12805 493 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 TFDP3Q5H9I0 405 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 HLA-DQA1Q5Y7H0 255 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 MAP1SQ66K74 1059 aaPredicted RBP7.4□□□□□ -1.22
CCDC171-201ENST00000380701 NECAB2Q7Z6G3 386 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 LRRC6Q86X45 466 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 JAMLQ86YT9 394 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 TMEM159Q96B96 161 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 ZDHHC4Q9NPG8 344 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 KCTD5Q9NXV2 234 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 SCN3BQ9NY72 215 aa7.4□□□□□ -1.22
CCDC171-201ENST00000380701 C2CD2LO14523 706 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 PQBP1O60828 265 aaKnown RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 BRD2P25440 801 aaKnown RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 TRPC1P48995 793 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 CCR3P51677 355 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 GIT2Q14161 759 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 LYPLAL1Q5VWZ2 237 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 ICE2Q659A1 982 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 SPATA21Q7Z572 469 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 SLC13A5Q86YT5 568 aaPredicted RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 RIN3Q8TB24 985 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 ATL1Q8WXF7 558 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 FDXACB1Q9BRP7 624 aaPredicted RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 ERP44Q9BS26 406 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 ILKAPQ9H0C8 392 aaPredicted RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 DDX43Q9NXZ2 648 aaKnown RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 SPG21Q9NZD8 308 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 AP4E1Q9UPM8 1137 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 RIMS1Q86UR5 1692 aaKnown RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 SERPINA4P29622 427 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 RTP1P59025 263 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 RUNX1T1Q06455 604 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 CATSPERGQ6ZRH7 1159 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 SLAIN1Q8ND83 568 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 GAS2L1Q99501 681 aaPredicted RBP7.4□□□□□ -1.23
CCDC171-201ENST00000380701 ABCC13Q9NSE7 274 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 FBXO28Q9NVF7 368 aa7.4□□□□□ -1.23
CCDC171-201ENST00000380701 POLG2Q9UHN1 485 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms