RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 DCXO43602 365 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 RALAP11233 206 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 LCP1P13796 627 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 PSMC3P17980 439 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 PDCLQ13371 301 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 TRIM72Q6ZMU5 477 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 SCD5Q86SK9 330 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 ARL14EPQ8N8R7 260 aaPredicted RBP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 ZNF397Q8NF99 534 aaPredicted RBP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 USP13Q92995 863 aaPredicted RBP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 CYP2S1Q96SQ9 504 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 ST7Q9NRC1 585 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 AIPL1Q9NZN9 384 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 NAGPAQ9UK23 515 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 DUSP12Q9UNI6 340 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 NCOR1O75376 2440 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 HELZP42694 1942 aaKnown RBP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 LRRC53A6NM62 1247 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 TLR5O60602 858 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 GABBR2O75899 941 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 PRAMEF12O95522 483 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 SRFP11831 508 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 VIPR2P41587 438 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 DAOAP59103 153 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 YWHAGP61981 247 aaKnown RBP eCLIP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 TRIM14Q14142 442 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 SFMBT2Q5VUG0 894 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 VITQ6UXI7 678 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 GAS2L3Q86XJ1 694 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 DDX42Q86XP3 938 aaKnown RBP eCLIP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 PPP1R13BQ96KQ4 1090 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 SLC22A12Q96S37 553 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 RPP25Q9BUL9 199 aaKnown RBP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 RNF38Q9H0F5 515 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 NMUR1Q9HB89 426 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 SLC2A4RGQ9NR83 387 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 THG1LQ9NWX6 298 aaKnown RBP13.91□□□□□ -0.18
CKAP2-202ENST00000378034 CYTH4Q9UIA0 394 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 CAPN11Q9UMQ6 739 aa13.91□□□□□ -0.18
CKAP2-202ENST00000378034 PI4K2BG5E9Z4 385 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 COCHO43405 550 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 MMEP08473 750 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 RARGP13631 454 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 ATP5C1P36542 298 aaKnown RBP13.9□□□□□ -0.18
CKAP2-202ENST00000378034 ZBED6P86452 979 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 ZXDAP98168 799 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 FCHO2Q0JRZ9 810 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 TAF3Q5VWG9 929 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 SPECC1LQ69YQ0 1117 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 BHLHA9Q7RTU4 235 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 IRF2BP2Q7Z5L9 587 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 PASD1Q8IV76 773 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 MSANTD4Q8NCY6 345 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 C1orf131Q8NDD1 294 aaKnown RBP13.9□□□□□ -0.18
CKAP2-202ENST00000378034 BPIFB1Q8TDL5 484 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 SYN2Q92777 582 aaPredicted RBP13.9□□□□□ -0.18
CKAP2-202ENST00000378034 GOLGA1Q92805 767 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 TRIM62Q9BVG3 475 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 TRMT61BQ9BVS5 477 aaKnown RBP13.9□□□□□ -0.18
CKAP2-202ENST00000378034 PLA2G2FQ9BZM2 168 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 NACA2Q9H009 215 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 MIS12Q9H081 205 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 CCSER2Q9H7U1 834 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 ABCC13Q9NSE7 274 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 OSER1Q9NX31 292 aa13.9□□□□□ -0.18
CKAP2-202ENST00000378034 BDP1A6H8Y1 2624 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 MBL2P11226 248 aaPredicted RBP13.89□□□□□ -0.19
CKAP2-202ENST00000378034 PGFP49763 221 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 FMO1Q01740 532 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 PFKPQ01813 784 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 ARID5AQ03989 594 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 ASIC2Q16515 512 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 ARHGAP29Q52LW3 1261 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 BTBD8Q5XKL5 378 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 VSTM4Q8IW00 320 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 YAF2Q8IY57 180 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 IPO4Q8TEX9 1081 aaKnown RBP13.89□□□□□ -0.19
CKAP2-202ENST00000378034 SLC20A1Q8WUM9 679 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 EDAQ92838 391 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 RSPRY1Q96DX4 576 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 SMG9Q9H0W8 520 aaKnown RBP13.89□□□□□ -0.19
CKAP2-202ENST00000378034 OLA1Q9NTK5 396 aaKnown RBP13.89□□□□□ -0.19
CKAP2-202ENST00000378034 LUC7L2Q9Y383 392 aaKnown RBP13.89□□□□□ -0.19
CKAP2-202ENST00000378034 YJEFN3A6XGL0 299 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 E5RJQ4 531 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 E7ENQ6 273 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 CHADO15335 359 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 CYP1A1P04798 512 aaPredicted RBP13.89□□□□□ -0.19
CKAP2-202ENST00000378034 CHRNB2P17787 502 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 PRKCIP41743 596 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 USP4Q13107 963 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 BSPRYQ5W0U4 402 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 BEND5Q7L4P6 421 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 ZDHHC17Q8IUH5 632 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 SCUBE3Q8IX30 993 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 IRF7Q92985 503 aa13.89□□□□□ -0.19
CKAP2-202ENST00000378034 CPXM1Q96SM3 734 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms