RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TRIP13Q15645 432 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TSC22D1Q15714 1073 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SLC44A4Q53GD3 710 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 HORMAD1Q86X24 394 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ST13P5Q8NFI4 369 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SHCBP1LQ9BZQ2 653 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ARMC7Q9H6L4 198 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PDGFRAP16234 1089 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PDIA2Q13087 525 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FBXL18Q96ME1 805 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RMND5AQ9H871 391 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 USP27XA6NNY8 438 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 AKT1P31749 480 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SOX6P35712 828 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ITGA2P17301 1181 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 DLG1Q12959 904 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CMASQ8NFW8 434 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 LXNQ9BS40 222 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ASCC2Q9H1I8 757 aaPredicted RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FAM153AQ9UHL3 310 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 DMGDHQ9UI17 866 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 NCANO14594 1321 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PSMD10O75832 226 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 PYGMP11217 842 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ANGPT1Q15389 498 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FBXO43Q4G163 708 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RNF139Q8WU17 664 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF606Q8WXB4 792 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SNX24Q9Y343 169 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF711Q9Y462 761 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 HOXA2O43364 376 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 POLR2EP19388 210 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 CNPY1Q3B7I2 92 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ANGEL2Q5VTE6 544 aaKnown RBP5.11□□□□□ -1.59
PCDH9-201ENST00000377861 IKBIPQ70UQ0 350 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 FCGR1BQ92637 280 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 SH2D3AQ9BRG2 576 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 TRIM31Q9BZY9 425 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ECE2O60344 883 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 ADORA1P30542 326 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 NNMTP40261 264 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 RAD23BP54727 409 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 GUCY1A3Q02108 690 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 C19orf60Q96EN9 201 aa5.11□□□□□ -1.59
PCDH9-201ENST00000377861 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 RAD51CO43502 376 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CHN2P52757 468 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 PMS1P54277 932 aaKnown RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 PLA2G4FQ68DD2 849 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ZBED8Q8IZ13 594 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ATP8B4Q8TF62 1192 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CYP39A1Q9NYL5 469 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 FTCDO95954 541 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ITGADQ13349 1161 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 FAXCQ5TGI0 409 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 SULF1Q8IWU6 871 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 UROC1Q96N76 676 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 MROH7Q68CQ1 1323 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ZBTB24O43167 697 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 PIGRP01833 764 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 POLR2LP62875 67 aaKnown RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 FAM189A2Q15884 450 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 THRSPQ92748 146 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ZNF317Q96PQ6 595 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 DENND2DQ9H6A0 471 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 PCDHGC3Q9UN70 934 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 SERPINH1P50454 418 aaKnown RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 TPD52P55327 224 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CLDN10P78369 228 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 MPP1Q00013 466 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 DEPDC1BQ8WUY9 529 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 TBC1D30Q9Y2I9 924 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 SAMD1Q6SPF0 538 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 TMEM139Q8IV31 216 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 DUSP9Q99956 384 aaKnown RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 SENP2Q9HC62 589 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 POC1B-GALNT4F8VUJ3 575 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 PDE9AO76083 593 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ATP6V0D1P61421 351 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 C17orf53Q8N3J3 647 aaPredicted RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 FASP25445 335 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 MIER2Q8N344 545 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CALN1Q9BXU9 219 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 GRIK1P39086 918 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 POU4F1Q01851 419 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 RCN1Q15293 331 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ADGRD1Q6QNK2 874 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 STX19Q8N4C7 294 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 SNCAIPQ9Y6H5 919 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CAMSAP1Q5T5Y3 1602 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 ERVK-24P63145 666 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CLK4Q9HAZ1 481 aaKnown RBP5.1□□□□□ -1.59
PCDH9-201ENST00000377861 TPRKBQ9Y3C4 175 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 KRT6CP48668 564 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 SLC12A1Q13621 1099 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 TXNDC11Q6PKC3 985 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 LINC00471Q8N535 108 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 CNBD2Q96M20 576 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 APOL4Q9BPW4 351 aa5.1□□□□□ -1.59
PCDH9-201ENST00000377861 PORCNQ9H237 461 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms