RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 INTS2Q9H0H0 1204 aaKnown RBP10.97□□□□□ -0.65
RTN3-206ENST00000377819 DLGAP2Q9P1A6 1054 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 RNF112Q9ULX5 631 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 SYNPO2Q9UMS6 1093 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 PRAG1Q86YV5 1406 aa10.97□□□□□ -0.65
RTN3-206ENST00000377819 ZBTB5O15062 677 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 PPP1R37O75864 691 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 FGFR1P11362 822 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 LBPP18428 481 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 EPHB2P29323 1055 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 IL5RAQ01344 420 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 APOBEC3FQ8IUX4 373 aaKnown RBP10.96□□□□□ -0.65
RTN3-206ENST00000377819 OR6J1Q8NGC5 347 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 MAGEE2Q8TD90 523 aaPredicted RBP10.96□□□□□ -0.65
RTN3-206ENST00000377819 WDR60Q8WVS4 1066 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 BBS4Q96RK4 519 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 RSAD1Q9HA92 442 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 GIT1Q9Y2X7 761 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 KMOO15229 486 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 TSPAN9O75954 239 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 PCDH8O95206 1070 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 RBP3P10745 1247 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 H2AFXP16104 143 aaPredicted RBP10.96□□□□□ -0.65
RTN3-206ENST00000377819 CASP4P49662 377 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 RGS7P49802 495 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 SCNN1BP51168 640 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 PTK7Q13308 1070 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 ITGA9Q13797 1035 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 NFYCQ13952 458 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 KPNB1Q14974 876 aaKnown RBP10.96□□□□□ -0.65
RTN3-206ENST00000377819 MIER2Q8N344 545 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 ENGASEQ8NFI3 743 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 PDS5AQ29RF7 1337 aaKnown RBP10.96□□□□□ -0.65
RTN3-206ENST00000377819 ITIH6Q6UXX5 1313 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 USP54Q70EL1 1684 aa10.96□□□□□ -0.65
RTN3-206ENST00000377819 ESYT3A0FGR9 886 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 ZNF879B4DU55 563 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 CHL1O00533 1208 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 AREL1O15033 823 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 PMPCBO75439 489 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 SEMA3DO95025 777 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 TSPAN19P0C672 248 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 CYP2D6P10635 497 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 RXRBP28702 533 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 MAPK9P45984 424 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 ALDH3A2P51648 485 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 GEMP55040 296 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 PSME3P61289 254 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 GRB14Q14449 540 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 BLOC1S5Q8TDH9 187 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 CAPSLQ8WWF8 208 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 OTUD5Q96G74 571 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 RNPC3Q96LT9 517 aaKnown RBP10.96□□□□□ -0.66
RTN3-206ENST00000377819 MFSD1Q9H3U5 465 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 LGR6Q9HBX8 967 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 SNX13Q9Y5W8 968 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 GPC6Q9Y625 555 aaPredicted RBP10.96□□□□□ -0.66
RTN3-206ENST00000377819 KPNA5O15131 536 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 CDK8P49336 464 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 SCRN1Q12765 414 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 SWI5Q1ZZU3 235 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 ZNF772Q68DY9 489 aaPredicted RBP10.96□□□□□ -0.66
RTN3-206ENST00000377819 MZT2BQ6NZ67 158 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.96□□□□□ -0.66
RTN3-206ENST00000377819 C9orf72Q96LT7 481 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 QTRT2Q9H974 415 aaKnown RBP10.96□□□□□ -0.66
RTN3-206ENST00000377819 USP18Q9UMW8 372 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 NEU2Q9Y3R4 380 aa10.96□□□□□ -0.66
RTN3-206ENST00000377819 URB1O60287 2271 aaKnown RBP10.96□□□□□ -0.66
RTN3-206ENST00000377819 USP19O94966 1318 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 LIFRP42702 1097 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 GMFBP60983 142 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 KYNUQ16719 465 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 DSG4Q86SJ6 1040 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 MAGED4Q96JG8 741 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 NT5C1AQ9BXI3 368 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 GPR108Q9NPR9 543 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 EFCAB10A6NFE3 127 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 PDGFRBP09619 1106 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 TFE3P19532 575 aaPredicted RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 AVPR1AP37288 418 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 PTH1RQ03431 593 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 PTPN12Q05209 780 aaKnown RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 CCDC144BQ3MJ40 725 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 ULK2Q8IYT8 1036 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 C4orf33Q8N1A6 199 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 RASGEF1AQ8N9B8 481 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 ZNF232Q9UNY5 417 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 MRPS7Q9Y2R9 242 aaKnown RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 ARHGEF10O15013 1369 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 FLT1P17948 1338 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 CCDC162PA2VCL2 907 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 TRIM64A6NGJ6 449 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 TCEA3O75764 348 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 RTN3O95197 1032 aaPredicted RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 BCL10O95999 233 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 EGFRP00533 1210 aa10.95□□□□□ -0.66
RTN3-206ENST00000377819 GEMIN4P57678 1058 aaKnown RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 DYNLL1P63167 89 aaKnown RBP10.95□□□□□ -0.66
RTN3-206ENST00000377819 GALNT3Q14435 633 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms