RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 LIN9Q5TKA1 542 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 GET4Q7L5D6 327 aaPredicted RBP13.05□□□□□ -0.32
VRK3-202ENST00000377011 TADA2BQ86TJ2 420 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 NT5DC4Q86YG4 428 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 KLHL7Q8IXQ5 586 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 C3orf20Q8ND61 904 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 BCAS4Q8TDM0 211 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 CTNNBL1Q8WYA6 563 aaPredicted RBP13.05□□□□□ -0.32
VRK3-202ENST00000377011 HPDLQ96IR7 371 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 NECTIN4Q96NY8 510 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 RPP25Q9BUL9 199 aaKnown RBP13.05□□□□□ -0.32
VRK3-202ENST00000377011 ZCWPW1Q9H0M4 648 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 XYLT2Q9H1B5 865 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 CARD9Q9H257 536 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 GGA2Q9UJY4 613 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 DNAJC12Q9UKB3 198 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 AJAP1Q9UKB5 411 aaPredicted RBP13.05□□□□□ -0.32
VRK3-202ENST00000377011 ITGA11Q9UKX5 1188 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 INSL5Q9Y5Q6 135 aa13.05□□□□□ -0.32
VRK3-202ENST00000377011 ZDBF2Q9HCK1 2354 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 ESYT3A0FGR9 886 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 ARHGEF37A1IGU5 675 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 ZSCAN5CA6NGD5 496 aaPredicted RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 TMCO5BA8MYB1 307 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 KRIT1O00522 736 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 SART1O43290 800 aaKnown RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 MOSPD3O75425 235 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 C4BPAP04003 597 aaKnown RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 GJA1P17302 382 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 NR1D1P20393 614 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 GPR15P49685 360 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 MCCD1P59942 119 aaPredicted RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 MRPS25P82663 173 aaKnown RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 RBP5P82980 135 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 MYL7Q01449 175 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 PPP3CAQ08209 521 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 TWF1Q12792 350 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 DRAP1Q14919 205 aaPredicted RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 SV2CQ496J9 727 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 SLC39A12Q504Y0 691 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 CCDC149Q6ZUS6 474 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 LIMS2Q7Z4I7 341 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 DAAM2Q86T65 1068 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 USP37Q86T82 979 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 RHOT2Q8IXI1 618 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 TCEAL8Q8IYN2 117 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 GPR152Q8TDT2 470 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 ING5Q8WYH8 240 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 ANKRD36BP1Q96IX9 119 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 PKMYT1Q99640 499 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 MRPL45Q9BRJ2 306 aaKnown RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 INTS2Q9H0H0 1204 aaKnown RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 RAB17Q9H0T7 212 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 PIDD1Q9HB75 910 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 TMBIM4Q9HC24 238 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 KIAA1586Q9HCI6 787 aa13.04□□□□□ -0.32
VRK3-202ENST00000377011 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.04□□□□□ -0.32
VRK3-202ENST00000377011 AFF4Q9UHB7 1163 aaKnown RBP13.04□□□□□ -0.32
VRK3-202ENST00000377011 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 C1RP00736 705 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 GBP1P32455 592 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 RAP1GAPP47736 663 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 DNA2P51530 1060 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 CLDN10P78369 228 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 CETN1Q12798 172 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 GPR17Q13304 367 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 HLTFQ14527 1009 aaKnown RBP eCLIP13.03□□□□□ -0.32
VRK3-202ENST00000377011 IER5LQ5T953 404 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 AGBL2Q5U5Z8 902 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 SDHAF4Q5VUM1 108 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 SPOPLQ6IQ16 392 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 INTS8Q75QN2 995 aaKnown RBP13.03□□□□□ -0.32
VRK3-202ENST00000377011 LRRC52Q8N7C0 313 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 HINFPQ9BQA5 517 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 SDCBP2Q9H190 292 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 GDAP2Q9NXN4 497 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 PLAAQ9Y263 795 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 YIPF1Q9Y548 306 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 MYO15AQ9UKN7 3530 aa13.03□□□□□ -0.32
VRK3-202ENST00000377011 GOLGA6L10A0A0M3HER8 536 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 FAM187AA6NFU0 413 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 MIF4GDA9UHW6 222 aaKnown RBP13.02□□□□□ -0.32
VRK3-202ENST00000377011 PRRG1O14668 218 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 DCXO43602 365 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.32
VRK3-202ENST00000377011 KRT14P02533 472 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 TNNC2P02585 160 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 MYZAPP0CAP1 466 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 KRT13P13646 458 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 ATF6P18850 670 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 CDH8P55286 799 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 PSMC1P62191 440 aaKnown RBP13.02□□□□□ -0.32
VRK3-202ENST00000377011 C11orf63Q6NUN7 778 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 TDRD5Q8NAT2 981 aaKnown RBP13.02□□□□□ -0.32
VRK3-202ENST00000377011 ZNF560Q96MR9 790 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 FNBP1Q96RU3 617 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 PI4K2AQ9BTU6 479 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 LRRC3Q9BY71 257 aa13.02□□□□□ -0.32
VRK3-202ENST00000377011 GPR88Q9GZN0 384 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms