RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 CDHR5Q9HBB8 845 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PSMC3IPQ9P2W1 217 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PHTF1Q9UMS5 762 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 MAFBQ9Y5Q3 323 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 CIB2O75838 187 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 KRT38O76015 456 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 BDNFP23560 247 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PMF1Q6P1K2 205 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 TCP10LQ8TDR4 215 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PLEKHA5Q9HAU0 1116 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PACSIN3Q9UKS6 424 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 TMEM88BA6NKF7 163 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 KPNA7A9QM74 516 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 LRCH4O75427 683 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 ARL2P36404 184 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 NDUFV1P49821 464 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 OGDHQ02218 1023 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 FAAP100Q0VG06 881 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 ARL13BQ3SXY8 428 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 LRRC6Q86X45 466 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 EMID1Q96A84 441 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-203ENST00000376619 FAM161BQ96MY7 647 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 PCYT2Q99447 389 aa11.57□□□□□ -0.56
HDAC6-203ENST00000376619 UBR2Q8IWV8 1755 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 NT5C1B-RDH14C9J2C7 533 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 MSCO60682 206 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PLA2G6O60733 806 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PPM1FP49593 454 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PEX5P50542 639 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 GBE1Q04446 702 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 SLC10A6Q3KNW5 377 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 MAP7D1Q3KQU3 841 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ZNF484Q5JVG2 852 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ZNF618Q5T7W0 954 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ZDHHC14Q8IZN3 488 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PPFIBP2Q8ND30 876 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 C3orf20Q8ND61 904 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ABHD16BQ9H3Z7 469 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 BFARQ9NZS9 450 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 WDR35Q9P2L0 1181 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 SNX10Q9Y5X0 201 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 NCANO14594 1321 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 HSPA4LO95757 839 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 FAM200BP0CF97 657 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ELNP15502 786 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 TCN1P20061 433 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-203ENST00000376619 CENPCQ03188 943 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 THOC5Q13769 683 aaKnown RBP11.56□□□□□ -0.56
HDAC6-203ENST00000376619 CHI3L2Q15782 390 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ANO4Q32M45 955 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 MGAT5BQ3V5L5 792 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 CRELD2Q6UXH1 353 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-203ENST00000376619 MTDHQ86UE4 582 aaKnown RBP11.56□□□□□ -0.56
HDAC6-203ENST00000376619 MECRQ9BV79 373 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 TSSK1BQ9BXA7 367 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PTPRHQ9HD43 1115 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 TMEM191CA6NGB0 347 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 OR4Q2P0C623 313 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 GNAT1P11488 350 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 GOT1P17174 413 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 SCTRP47872 440 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PIGZQ86VD9 579 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 ZNF560Q96MR9 790 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 FAM129AQ9BZQ8 928 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.56□□□□□ -0.56
HDAC6-203ENST00000376619 PCDH10Q9P2E7 1040 aa11.56□□□□□ -0.56
HDAC6-203ENST00000376619 C17orf102A2RUQ5 167 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 DNALI1O14645 258 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 LIASO43766 372 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 TRPA1O75762 1119 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 IRF1P10914 325 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 IL1R2P27930 398 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 KLHL38Q2WGJ6 581 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 FASTKD1Q53R41 847 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 PARP9Q8IXQ6 854 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 SPATA6LQ8N4H0 392 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 N4BP2L2Q92802 583 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 TTC25Q96NG3 672 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 SNRNP25Q9BV90 132 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 WHRNQ9P202 907 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 SLC39A10Q9ULF5 831 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 UBQLN1Q9UMX0 589 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 GOLGA8QA0A0J9YX86 632 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 GOLGA8OA6NCC3 632 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 GOLGA8NF8WBI6 632 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 FSCN2O14926 492 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 TRAPPC3O43617 180 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 BRCC3P46736 316 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 GEMIN4P57678 1058 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 MTHFD1LQ6UB35 978 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 POLNQ7Z5Q5 900 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 RASSF3Q86WH2 238 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 CRLF3Q8IUI8 442 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 HDAC11Q96DB2 347 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 DDX27Q96GQ7 796 aaKnown RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 GRHL1Q9NZI5 618 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 ARL2BPQ9Y2Y0 163 aa11.55□□□□□ -0.56
HDAC6-203ENST00000376619 UBA6A0AVT1 1052 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-203ENST00000376619 HAUS5O94927 633 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms