RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CYP39A1Q9NYL5 469 aa14.14□□□□□ -0.15
COL4A1-201ENST00000375820 POLG2Q9UHN1 485 aa14.14□□□□□ -0.15
COL4A1-201ENST00000375820 NEO1Q92859 1461 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CPSF1Q10570 1443 aaKnown RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 POMCP01189 267 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 TNNI3P19429 210 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 GUCA1AP43080 201 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SERPINB8P50452 374 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SCNN1BP51168 640 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CBWD1Q9BRT8 395 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 OSGEPQ9NPF4 335 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 KLHL1Q9NR64 748 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 TMCC3Q9ULS5 477 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CNTNAP2Q9UHC6 1331 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 TRIM43BA6NCK2 446 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 LRRIQ3A6PVS8 624 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 EIF3DO15371 548 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CTXN3Q4LDR2 81 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SLC20A1Q8WUM9 679 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 FAM153AQ9UHL3 310 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 PAIP2BQ9ULR5 123 aaKnown RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 DYRK1BQ9Y463 629 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 GOLGA8TH3BQL2 631 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 ADRA2BP18089 450 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SOX6P35712 828 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 IL5RAQ01344 420 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 VAC14Q08AM6 782 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 ZSWIM1Q9BR11 485 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SPRTNQ9H040 489 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 VPS33BQ9H267 617 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 MPP6Q9NZW5 540 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SLC2A4P14672 509 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 RAB14P61106 215 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 ERVK-24P63145 666 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CHRNB3Q05901 458 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 EZH2Q15910 746 aaKnown RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 PLEKHA7Q6IQ23 1121 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 C11orf88Q6PI97 169 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 DOK6Q6PKX4 331 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SLC30A10Q6XR72 485 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 C3orf67Q6ZVT6 689 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 PPP1R13LQ8WUF5 828 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 KCTD14Q9BQ13 255 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CLPBQ9H078 707 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 RMND5AQ9H871 391 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 MAP3K13O43283 966 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 ARP10275 920 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 CD44P16070 742 aaKnown RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 PSMC3P17980 439 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 YWHAQP27348 245 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 HNRNPH1P31943 449 aaKnown RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 RHOAP61586 193 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 EXD1Q8NHP7 514 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 YME1L1Q96TA2 773 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 ROPN1BQ9BZX4 212 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SENP6Q9GZR1 1112 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 ROPN1Q9HAT0 212 aaPredicted RBP14.13□□□□□ -0.15
COL4A1-201ENST00000375820 SH3BP4Q9P0V3 963 aa14.13□□□□□ -0.15
COL4A1-201ENST00000375820 A0A087X0T9 212 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 JCHAINP01591 159 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 FAM228BP0C875 321 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 MAPK11Q15759 364 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 PDPK2PQ6A1A2 396 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 RIPOR1Q6ZS17 1223 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ZNF512BQ96KM6 892 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-201ENST00000375820 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SEPT3Q9UH03 358 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 GATAD2AQ86YP4 633 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 RNF148Q8N7C7 305 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 LPCAT1Q8NF37 534 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ACER1Q8TDN7 264 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 PPP1R10Q96QC0 940 aaKnown RBP14.12□□□□□ -0.15
COL4A1-201ENST00000375820 CCDC3Q9BQI4 270 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ZMYM5Q9UJ78 669 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SPATA2Q9UM82 520 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 NCAPD2Q15021 1401 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 GLRA3O75311 464 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SPAG6O75602 509 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 RPA1P27694 616 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 FDFT1P37268 417 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ZCWPW2Q504Y3 356 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 AKIRIN2Q53H80 203 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 RNF180Q86T96 592 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SCUBE1Q8IWY4 988 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ADAM32Q8TC27 787 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SPACA7Q96KW9 195 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ZFYVE1Q9HBF4 777 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 GPAMQ9HCL2 828 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 CTDNEP1O95476 244 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 ACAT1P24752 427 aaKnown RBP14.12□□□□□ -0.15
COL4A1-201ENST00000375820 NT5C2P49902 561 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 OTUD3Q5T2D3 398 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-201ENST00000375820 DNAJC14Q6Y2X3 702 aaPredicted RBP14.12□□□□□ -0.15
COL4A1-201ENST00000375820 TRMT11Q7Z4G4 463 aaKnown RBP14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SERAC1Q96JX3 654 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 VTA1Q9NP79 307 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 DCDC2Q9UHG0 476 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 SATB2Q9UPW6 733 aa14.12□□□□□ -0.15
COL4A1-201ENST00000375820 A0A1B0GW55 424 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms