RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 RIN3Q8TB24 985 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 ETNPPLQ8TBG4 499 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 NCLNQ969V3 563 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 ZBTB1Q9Y2K1 713 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 CCDC162PA2VCL2 907 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 PABPN1LA6NDY0 278 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 PRPF4O43172 522 aaKnown RBP eCLIP10.59□□□□□ -0.71
CD28-202ENST00000374481 RARBP10826 455 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 CRABP2P29373 138 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 WDR4P57081 412 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 MAP3K10Q02779 954 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 RUNX1T1Q06455 604 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 TMEM62Q0P6H9 643 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 NFX1Q12986 1120 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 ARMCX4Q5H9R4 360 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 HGSNATQ68CP4 663 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 TAF2Q6P1X5 1199 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 ZNF354CQ86Y25 554 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 CAMK1DQ8IU85 385 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 PAWRQ96IZ0 340 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 KLHL32Q96NJ5 620 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 IL1RL2Q9HB29 575 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 TCF7L2Q9NQB0 619 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 PCSK1NQ9UHG2 260 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 ZNF221Q9UK13 617 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 E2F8A0AVK6 867 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 HNRNPDLO14979 420 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 FYNP06241 537 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 ARPP19P56211 112 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 NME3Q13232 169 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 XKR5Q6UX68 686 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 PIWIL2Q8TC59 973 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 ALG3Q92685 438 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 RMDN1Q96DB5 314 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 KAZALD1Q96I82 304 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 QTRT2Q9H974 415 aaKnown RBP10.59□□□□□ -0.71
CD28-202ENST00000374481 SHOC2Q9UQ13 582 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 SESN1Q9Y6P5 492 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 CNTNAP5Q8WYK1 1306 aa10.59□□□□□ -0.71
CD28-202ENST00000374481 ZNF862O60290 1169 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 YWHAEP62258 255 aaKnown RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 SP4Q02446 784 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 BMPR2Q13873 1038 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 GIT2Q14161 759 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 POLD3Q15054 466 aaPredicted RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 TPTE2Q6XPS3 522 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 RAB44Q7Z6P3 723 aaPredicted RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 PDSS2Q86YH6 399 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 MYO1HQ8N1T3 1032 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 CPA5Q8WXQ8 436 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 NACC1Q96RE7 527 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 NR2E1Q9Y466 385 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 OVOS2A0A0J9YW53 1432 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 OVOS2Q6IE36 1432 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 HEATR9A2RTY3 570 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 KLRC4O43908 158 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 PRPSAP2O60256 369 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 GLRA3O75311 464 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 KRT19P08727 400 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 RRM1P23921 792 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 PSMB9P28065 219 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 LIG4P49917 911 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 CDK9P50750 372 aaKnown RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 INHBEP58166 350 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 FASTKD1Q53R41 847 aaKnown RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 SFT2D3Q587I9 215 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 TMTC4Q5T4D3 741 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 SLC2A7Q6PXP3 512 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 PRUNE1Q86TP1 453 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 SFRP1Q8N474 314 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 CCNYQ8ND76 341 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 GGA1Q9UJY5 639 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 PCDHA3Q9Y5H8 950 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 FUOMA2VDF0 154 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 USP12O75317 370 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 CRTAMO95727 393 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 RALBP11234 206 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 IL12AP29459 219 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 PRKCIP41743 596 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 RFX5P48382 616 aaPredicted RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 SLC1A6P48664 564 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 FAAP100Q0VG06 881 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 BNIP3Q12983 259 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 ABRAXAS1Q6UWZ7 409 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 ALLCQ8N6M5 410 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 OXCT2Q9BYC2 517 aaPredicted RBP10.58□□□□□ -0.72
CD28-202ENST00000374481 IRF2BPLQ9H1B7 796 aa10.58□□□□□ -0.72
CD28-202ENST00000374481 A0A1W2PQ72 361 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 H6PDO95479 791 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 CDK4P11802 303 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 MARCKSL1P49006 195 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 GTF2IP78347 998 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 GNA12Q03113 381 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 GRB10Q13322 594 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 CHRNA2Q15822 529 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 GRPEL2Q8TAA5 225 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 RORBQ92753 470 aa10.57□□□□□ -0.72
CD28-202ENST00000374481 ASPSCR1Q9BZE9 553 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms