RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PFKPQ01813 784 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 FCHO2Q0JRZ9 810 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 SCD5Q86SK9 330 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 STK32AQ8WU08 396 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 LHX5Q9H2C1 402 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 CNGB3Q9NQW8 809 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 OSER1Q9NX31 292 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 IFNKQ9P0W0 207 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 ARHGAP26Q9UNA1 814 aa16.8■□□□□ 0.28
HDHD3-202ENST00000374180 OBSL1O75147 1896 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 PIK3R2O00459 728 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 GABBR2O75899 941 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 OLFM2O95897 454 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 MBL2P11226 248 aaPredicted RBP16.79■□□□□ 0.28
HDHD3-202ENST00000374180 RALAP11233 206 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 RARGP13631 454 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 ACADSBP45954 432 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 PASD1Q8IV76 773 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 SH3RF2Q8TEC5 729 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 NDRG1Q92597 394 aaKnown RBP16.79■□□□□ 0.28
HDHD3-202ENST00000374180 IRF7Q92985 503 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 CYLDQ9NQC7 956 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.79■□□□□ 0.28
HDHD3-202ENST00000374180 CLIC5Q9NZA1 410 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 CEP83Q9Y592 693 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 ANAPC1Q9H1A4 1944 aa16.79■□□□□ 0.28
HDHD3-202ENST00000374180 PATJQ8NI35 1801 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 CHADO15335 359 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 TBX18O95935 607 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 TPM3P06753 285 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
HDHD3-202ENST00000374180 RPL34P49207 117 aaKnown RBP16.78■□□□□ 0.28
HDHD3-202ENST00000374180 YWHAGP61981 247 aaKnown RBP eCLIP16.78■□□□□ 0.28
HDHD3-202ENST00000374180 ARHGAP29Q52LW3 1261 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 TAF3Q5VWG9 929 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 CC2D1AQ6P1N0 951 aaPredicted RBP16.78■□□□□ 0.28
HDHD3-202ENST00000374180 TADA2BQ86TJ2 420 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 SCUBE3Q8IX30 993 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 SCML4Q8N228 414 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 WDTC1Q8N5D0 677 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 EPS8L1Q8TE68 723 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 NOX5Q96PH1 765 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 CDK5RAP1Q96SZ6 601 aaKnown RBP16.78■□□□□ 0.28
HDHD3-202ENST00000374180 SLC4A5Q9BY07 1137 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 MIS12Q9H081 205 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 SMPD4Q9NXE4 827 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 CYTH4Q9UIA0 394 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 CPQQ9Y646 472 aa16.78■□□□□ 0.28
HDHD3-202ENST00000374180 TMEM221A6NGB7 291 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 YJEFN3A6XGL0 299 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 E7ENQ6 273 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 M0R296 226 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 LEFTY2O00292 366 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 FBXO21O94952 628 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 DAOAP59103 153 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 PLCB2Q00722 1185 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 ARID5AQ03989 594 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 PDCLQ13371 301 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 C10orf120Q5SQS8 335 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 BTBD8Q5XKL5 378 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 TMEM110Q86TL2 294 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 NOP9Q86U38 636 aaKnown RBP16.77■□□□□ 0.28
HDHD3-202ENST00000374180 ZNF677Q86XU0 584 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 ZNF276Q8N554 614 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 DDX1Q92499 740 aaKnown RBP16.77■□□□□ 0.28
HDHD3-202ENST00000374180 C1QTNF1Q9BXJ1 281 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 GKN1Q9NS71 199 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 DNMT3LQ9UJW3 386 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 NUDT5Q9UKK9 219 aa16.77■□□□□ 0.28
HDHD3-202ENST00000374180 TECTAO75443 2155 aa16.77■□□□□ 0.27
HDHD3-202ENST00000374180 TCF3P15923 654 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 ZXDBP98169 803 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 MTF1Q14872 753 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 ZNF77Q15935 545 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 SLC44A4Q53GD3 710 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 BSPRYQ5W0U4 402 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 KLHDC10Q6PID8 442 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 RSRC2Q7L4I2 434 aaKnown RBP16.76■□□□□ 0.27
HDHD3-202ENST00000374180 BHLHA9Q7RTU4 235 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 DDX42Q86XP3 938 aaKnown RBP eCLIP16.76■□□□□ 0.27
HDHD3-202ENST00000374180 FMNL3Q8IVF7 1028 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 TMEM35BQ8NCS4 154 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 RIN3Q8TB24 985 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 IRGQQ8WZA9 623 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 ASIC4Q96FT7 647 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 ZFYVE19Q96K21 471 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 PPP1R13BQ96KQ4 1090 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 NUP58Q9BVL2 599 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 XPO4Q9C0E2 1151 aaKnown RBP16.76■□□□□ 0.27
HDHD3-202ENST00000374180 TRPV5Q9NQA5 729 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 CA14Q9ULX7 337 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 MYO6Q9UM54 1294 aa16.76■□□□□ 0.27
HDHD3-202ENST00000374180 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
HDHD3-202ENST00000374180 E5RJQ4 531 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 CBFA2T2O43439 604 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 MMEP08473 750 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 CCDC172P0C7W6 258 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 PBX1P40424 430 aa16.75■□□□□ 0.27
HDHD3-202ENST00000374180 SNX16P57768 344 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms