RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 PJA1Q8NG27 643 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 RIN3Q8TB24 985 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 SECISBP2LQ93073 1101 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 CDK5RAP1Q96SZ6 601 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 NELL2Q99435 816 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 FAM83CQ9BQN1 747 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 DDX23Q9BUQ8 820 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 LSM14BQ9BX40 385 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 FOXQ1Q9C009 403 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 C8orf33Q9H7E9 229 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 CYLDQ9NQC7 956 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 DUS2Q9NX74 493 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 GTSE1Q9NYZ3 720 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 LIMA1Q9UHB6 759 aaKnown RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 SIT1Q9Y3P8 196 aa12.65□□□□□ -0.38
HDAC8-201ENST00000373554 KIF26AQ9ULI4 1882 aaPredicted RBP12.65□□□□□ -0.38
HDAC8-201ENST00000373554 ZDBF2Q9HCK1 2354 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 KMT2EQ8IZD2 1858 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 A0A1W2PQH9 124 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 BECN2A8MW95 431 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 TULP2O00295 520 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ZBED1O96006 694 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 CALCAP01258 141 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ZNF18P17022 549 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 CD72P21854 359 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ATP5C1P36542 298 aaKnown RBP12.64□□□□□ -0.39
HDAC8-201ENST00000373554 NUBP1P53384 320 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 COPB1P53618 953 aaKnown RBP12.64□□□□□ -0.39
HDAC8-201ENST00000373554 MLLT6P55198 1093 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-201ENST00000373554 TNK2Q07912 1038 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ADIGQ0VDE8 80 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 KCNMA1Q12791 1236 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 MEA1Q16626 185 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 TRIM68Q6AZZ1 485 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ALYREFQ86V81 257 aaKnown RBP12.64□□□□□ -0.39
HDAC8-201ENST00000373554 RALGPS2Q86X27 583 aaPredicted RBP12.64□□□□□ -0.39
HDAC8-201ENST00000373554 CPA6Q8N4T0 437 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 KIAA1958Q8N8K9 716 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 OSCP1Q8WVF1 389 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 KCTD13Q8WZ19 329 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 FAM3CQ92520 227 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ATP2A3Q93084 1043 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 PRRX2Q99811 253 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ZSWIM1Q9BR11 485 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 ULBP1Q9BZM6 244 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 KCNH6Q9H252 994 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 EBF3Q9H4W6 596 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 LTB4R2Q9NPC1 389 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 CLIC5Q9NZA1 410 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 CFAP97Q9P2B7 532 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 WNT6Q9Y6F9 365 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 COL4A3Q01955 1670 aa12.64□□□□□ -0.39
HDAC8-201ENST00000373554 LGALS16A8MUM7 142 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 SPECC1L-ADORA2AF8WAN1 911 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 SLC9A3R1O14745 358 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 NCAM2O15394 837 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 RARGP13631 454 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 UCHL3P15374 230 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 CTHP32929 405 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 SOX9P48436 509 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 PGFP49763 221 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 YWHAGP61981 247 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 AMPD2Q01433 879 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 PTK2Q05397 1052 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 RUNX3Q13761 415 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 C10orf120Q5SQS8 335 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 KLHDC7AQ5VTJ3 777 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 KLHDC10Q6PID8 442 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 RSRC2Q7L4I2 434 aaKnown RBP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 SCD5Q86SK9 330 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 TTC8Q8TAM2 541 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 SLC35F5Q8WV83 523 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 ZNF606Q8WXB4 792 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 FUCA2Q9BTY2 467 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 OSBPL6Q9BZF3 934 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 NMUR1Q9HB89 426 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 PLCB1Q9NQ66 1216 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 HPS4Q9NQG7 708 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 CNGB3Q9NQW8 809 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 OSER1Q9NX31 292 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 AJAP1Q9UKB5 411 aaPredicted RBP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 NDRG2Q9UN36 371 aaKnown RBP12.63□□□□□ -0.39
HDAC8-201ENST00000373554 SH3BP1Q9Y3L3 701 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 FHOD1Q9Y613 1164 aa12.63□□□□□ -0.39
HDAC8-201ENST00000373554 ZNF318Q5VUA4 2279 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 E2F8A0AVK6 867 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 FAM170BA6NMN3 283 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 PI15O43692 258 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 NFATC1O95644 943 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 DCNP07585 359 aaKnown RBP12.62□□□□□ -0.39
HDAC8-201ENST00000373554 ATP1A3P13637 1013 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 LCP1P13796 627 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 ARSAP15289 507 aa12.62□□□□□ -0.39
HDAC8-201ENST00000373554 TARSP26639 723 aaKnown RBP12.62□□□□□ -0.39
HDAC8-201ENST00000373554 RGS7P49802 495 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms