RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 SERAC1Q96JX3 654 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 NT5C1AQ9BXI3 368 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 IFT122Q9HBG6 1241 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 RAB6BQ9NRW1 208 aa14.88□□□□□ -0.03
CD48-201ENST00000368045 WDR91A4D1P6 747 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 GOLGA8RI6L899 631 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 CXCL11O14625 94 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 LIN7AO14910 233 aaPredicted RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 MDM4O15151 490 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 KIF1CO43896 1103 aaKnown RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 PEX11AO75192 247 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 CBX6O95503 412 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 GJB1P08034 283 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 GNAZP19086 355 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 NDST1P52848 882 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 BCAR1P56945 870 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 YWHAZP63104 245 aaKnown RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 CDK16Q00536 496 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 PRKG1Q13976 671 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 TTLL4Q14679 1199 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 KCTD2Q14681 263 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 SLC10A6Q3KNW5 377 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ANKRD20A2Q5SQ80 823 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ANKRD20A1Q5TYW2 823 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ANKRD20A3Q5VUR7 823 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ZC3H18Q86VM9 953 aaKnown RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 CDR2LQ86X02 465 aaPredicted RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 LRRC6Q86X45 466 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 CDKL3Q8IVW4 592 aaPredicted RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 TAB3Q8N5C8 712 aaPredicted RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 LINC01465Q8N7H1 131 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 RFWD2Q8NHY2 731 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 UBA3Q8TBC4 463 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 MTBPQ96DY7 904 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ZNF570Q96NI8 536 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ZNF670Q9BS34 389 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ADAM33Q9BZ11 813 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 ASCC2Q9H1I8 757 aaPredicted RBP14.87□□□□□ -0.03
CD48-201ENST00000368045 CNTN3Q9P232 1028 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 TTLL3Q9Y4R7 772 aa14.87□□□□□ -0.03
CD48-201ENST00000368045 E5RJQ4 531 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 COPEO14579 308 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 KCNN4O15554 427 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 ZBED1O96006 694 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 C1QAP02745 245 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 IQCF3P0C7M6 154 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 TXNP10599 105 aaKnown RBP14.86□□□□□ -0.03
CD48-201ENST00000368045 CYP3A5P20815 502 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 OSBPP22059 807 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 CCNFP41002 786 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 SERPINB4P48594 390 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 CDK18Q07002 472 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 CCDC14Q49A88 953 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 MAP1SQ66K74 1059 aaPredicted RBP14.86□□□□□ -0.03
CD48-201ENST00000368045 TRNP1Q6NT89 227 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 ZDHHC17Q8IUH5 632 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 RAB3IL1Q8TBN0 382 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 PTPRN2Q92932 1015 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 SKA1Q96BD8 255 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 MIEF2Q96C03 454 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 PTCD3Q96EY7 689 aaKnown RBP14.86□□□□□ -0.03
CD48-201ENST00000368045 MMP19Q99542 508 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 KLF6Q99612 283 aaPredicted RBP14.86□□□□□ -0.03
CD48-201ENST00000368045 IQCGQ9H095 443 aaKnown RBP14.86□□□□□ -0.03
CD48-201ENST00000368045 POPDC2Q9HBU9 364 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 PCDH18Q9HCL0 1135 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 TSPAN16Q9UKR8 245 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 COL1A2P08123 1366 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 ANK1P16157 1881 aa14.86□□□□□ -0.03
CD48-201ENST00000368045 PGK2P07205 417 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 PYGBP11216 843 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 NEFHP12036 1026 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ZFXP17010 805 aaPredicted RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 EPHB2P29323 1055 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 C15orf59Q2T9L4 293 aaPredicted RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 C1orf228Q6PIY5 440 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 SESTD1Q86VW0 696 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 FBXO16Q8IX29 292 aaPredicted RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 GPC2Q8N158 579 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 PQLC3Q8N755 202 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.85□□□□□ -0.03
CD48-201ENST00000368045 NSL1Q96IY1 281 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ZNF668Q96K58 619 aaPredicted RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 FAM111AQ96PZ2 611 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 BTBD10Q9BSF8 475 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 SLC4A5Q9BY07 1137 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ETNK2Q9NVF9 386 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 DPP3Q9NY33 737 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 HEY2Q9UBP5 337 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ZC3H7BQ9UGR2 993 aaKnown RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 DCTN4Q9UJW0 460 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 A0A0G2JND7 137 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ASB14A6NK59 587 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 TRIM49D1C9J1S8 452 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 ATP5BP06576 529 aaKnown RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 PFKMP08237 780 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 DLDP09622 509 aaKnown RBP14.85□□□□□ -0.03
CD48-201ENST00000368045 TPBGLP0DKB5 382 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 TPSB2P20231 275 aa14.85□□□□□ -0.03
CD48-201ENST00000368045 IL4RP24394 825 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms