RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 KDM5DQ9BY66 1539 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 EME2A4GXA9 379 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 H3BSH0 61 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 GUCA1AP43080 201 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 YWHAZP63104 245 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 SNX17Q15036 470 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PDIA6Q15084 440 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ANKS1BQ7Z6G8 1248 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PHF20Q9BVI0 1012 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 KRT84Q9NSB2 600 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 CDY2AQ9Y6F7 541 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ANKRD63C9JTQ0 380 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 hCG_1984214I3L0E3 225 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PSMD12O00232 456 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PEX1O43933 1283 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 DLG4P78352 724 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 NFIL3Q16649 462 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 GDF6Q6KF10 455 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 KRT78Q8N1N4 520 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 OSBPL1AQ9BXW6 950 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 WNT8AQ9H1J5 351 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 SLC28A3Q9HAS3 691 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 DDX4Q9NQI0 724 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PCDHB8Q9UN66 801 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 RPS6KL1Q9Y6S9 549 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 C2orf81A6NN90 581 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 LACTBL1A8MY62 500 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ISM1B1AKI9 464 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 WDR47O94967 919 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ZNF682O95780 498 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ABL2P42684 1182 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 VSNL1P62760 191 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 MFSD10Q14728 455 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 HIST2H2ACQ16777 129 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 KLHL38Q2WGJ6 581 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 HIST2H2AA3Q6FI13 130 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 SLFN11Q7Z7L1 901 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 COLGALT2Q8IYK4 626 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 C12orf29Q8N999 325 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 SNRNP27Q8WVK2 155 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TSSK1BQ9BXA7 367 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TAF1DQ9H5J8 278 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TECPR2O15040 1411 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 GAS2O43903 313 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TARSP26639 723 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 NPTX2P47972 431 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 NRLP54845 237 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 CUL4AQ13619 759 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 UBXN2BQ14CS0 331 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 GLIS3Q8NEA6 775 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 WDR24Q96S15 920 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 KCNS3Q9BQ31 491 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TRIM9Q9C026 710 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 RPS6KB2Q9UBS0 482 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 E9PBE3 544 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 MICAL2O94851 1124 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 KLHL18O94889 574 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 YWHAQP27348 245 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TNFSF9P41273 254 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 CYP4F2P78329 520 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 CNSTQ6PJW8 725 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ZDHHC4Q9NPG8 344 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ING3Q9NXR8 418 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 DIS3Q9Y2L1 958 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 B2RBV5 119 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 NUDT2P50583 147 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 DHX34Q14147 1143 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 GALNT3Q14435 633 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 SMPDL3BQ92485 455 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 MTG1Q9BT17 334 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 GRIP2Q9C0E4 1043 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TNKS2Q9H2K2 1166 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TRABDQ9H4I3 376 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TRIM45Q9H8W5 580 aaPredicted RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PARVBQ9HBI1 364 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 RBM12Q9NTZ6 932 aaKnown RBP7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PCDHB9Q9Y5E1 797 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 ADGRG1Q9Y653 693 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 PZPP20742 1482 aa7.59□□□□□ -1.19
VPS13A-202ENST00000357409 TBL1XO60907 577 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 SCNN1AP37088 669 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 OXCT1P55809 520 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 OCA2Q04671 838 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 ATP13A4Q4VNC1 1196 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 PSRC1Q6PGN9 363 aaPredicted RBP7.59□□□□□ -1.2
VPS13A-202ENST00000357409 MACC1Q6ZN28 852 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 EFL1Q7Z2Z2 1120 aaKnown RBP7.59□□□□□ -1.2
VPS13A-202ENST00000357409 SLC9A9Q8IVB4 645 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 SLC4A5Q9BY07 1137 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 MTFR1LQ9H019 292 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 STN1Q9H668 368 aaKnown RBP7.59□□□□□ -1.2
VPS13A-202ENST00000357409 PSD3Q9NYI0 1048 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 STON1Q9Y6Q2 735 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 KIF24Q5T7B8 1368 aa7.59□□□□□ -1.2
VPS13A-202ENST00000357409 IRF6O14896 467 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 CDC25CP30307 473 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PPP2R2AP63151 447 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 SP3Q02447 781 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 ACAD10Q6JQN1 1059 aa7.58□□□□□ -1.2
VPS13A-202ENST00000357409 PPP4R3CPQ6ZMV5 832 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms