RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KCNT1Q5JUK3 1230 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 CDC73Q6P1J9 531 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 FEZF2Q8TBJ5 459 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 FAM210AQ96ND0 272 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 CHID1Q9BWS9 393 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 RABGEF1Q9UJ41 708 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 SLC1A6P48664 564 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 SLC34A1Q06495 639 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 SNRNP35Q16560 246 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 OR6Y1Q8NGX8 325 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 BLOC1S5Q8TDH9 187 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 TUFT1Q9NNX1 390 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 MYRFQ9Y2G1 1151 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 FASP25445 335 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 HK2P52789 917 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ARMC6Q6NXE6 501 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 IKBIPQ70UQ0 350 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 NECAB2Q7Z6G3 386 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 NSUN6Q8TEA1 469 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 WDR60Q8WVS4 1066 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 PLEKHG4BQ96PX9 1271 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 RSAD1Q9HA92 442 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 CRLS1Q9UJA2 301 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ANKARQ7Z5J8 1434 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 NLRP1Q9C000 1473 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 IDH3BO43837 385 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 PROSER1Q86XN7 944 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 CINPQ9BW66 212 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 THAP2Q9H0W7 228 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 COPG2Q9UBF2 871 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 NR1D2Q14995 579 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 MTFR1Q15390 333 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 LRRC6Q86X45 466 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 PPP1R14BQ96C90 147 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 BTBD10Q9BSF8 475 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 PIGUQ9H490 435 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ERAP1Q9NZ08 941 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ERBB3P21860 1342 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ZNF335Q9H4Z2 1342 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 TEX28O15482 410 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ATP4AP20648 1035 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 TMEM63BQ5T3F8 832 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 ANKS6Q68DC2 871 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 YTHDF3Q7Z739 585 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 RORBQ92753 470 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 N6AMT1Q9Y5N5 214 aa11.37□□□□□ -0.59
GTF3C1-201ENST00000356183 TSPAN19P0C672 248 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 ORC2Q13416 577 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 FAM98BQ52LJ0 330 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 PGBD3Q8N328 593 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 SH3GLB1Q9Y371 365 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 FCGR1AP12314 374 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 KLRC1P26715 233 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 YWHAQP27348 245 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 TMEM62Q0P6H9 643 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 KYAT1Q16773 422 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 B3GNT6Q6ZMB0 384 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 BTN2A1Q7KYR7 527 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 KRT74Q7RTS7 529 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 FAR2Q96K12 515 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 RMI1Q9H9A7 625 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 RNF146Q9NTX7 359 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 VAV3Q9UKW4 847 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 PREX2Q70Z35 1606 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 GUCA1AP43080 201 aaPredicted RBP11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 NT5C2P49902 561 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 SPANXN2Q5MJ10 180 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 GATAD2AQ86YP4 633 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 PABPC3Q9H361 631 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 WDR35Q9P2L0 1181 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 SHROOM2Q13796 1616 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 MT-CO1P00395 513 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 PYDC2Q56P42 97 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 PERM1Q5SV97 790 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 CASP12Q6UXS9 341 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 ANKS1AQ92625 1134 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 VPS33AQ96AX1 596 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 PPP1R2P1Q96PQ5 205 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 FOXP3Q9BZS1 431 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 MAN1C1Q9NR34 630 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 TADA2AO75478 443 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 RHOBTB3O94955 611 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 FGFR2P21802 821 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 EPHB2P29323 1055 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 NRF1Q16656 503 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 QRICH1Q2TAL8 776 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 APOL4Q9BPW4 351 aa11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 DMGDHQ9UI17 866 aaKnown RBP11.36□□□□□ -0.59
GTF3C1-201ENST00000356183 EFCAB6Q5THR3 1501 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 CCDC182A6NF36 153 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 CHD1O14646 1710 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 SSNA1O43805 119 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 NCAM1P13591 858 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 CCDC130P13994 396 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 BCAP31P51572 246 aa11.35□□□□□ -0.59
GTF3C1-201ENST00000356183 RPL10AP62906 217 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms