RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 CAVIN2O95810 425 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 SLFN14P0C7P3 912 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 KCNA4P22459 653 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 TIE1P35590 1138 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 ASPAP45381 313 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 GPRIN1Q7Z2K8 1008 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 DDX42Q86XP3 938 aaKnown RBP eCLIP16.82■□□□□ 0.28
PDGFA-201ENST00000354513 BBS7Q8IWZ6 715 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
PDGFA-201ENST00000354513 SMARCD1Q96GM5 515 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 TWNKQ96RR1 684 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 DUSP9Q99956 384 aaKnown RBP16.82■□□□□ 0.28
PDGFA-201ENST00000354513 CSNK1G1Q9HCP0 422 aa16.82■□□□□ 0.28
PDGFA-201ENST00000354513 HHLA1C9JL84 531 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 TRIM24O15164 1050 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 HOXC11O43248 304 aaPredicted RBP16.81■□□□□ 0.28
PDGFA-201ENST00000354513 AP1G2O75843 785 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 KCNK5O95279 499 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 ASS1P00966 412 aaKnown RBP16.81■□□□□ 0.28
PDGFA-201ENST00000354513 NR3C1P04150 777 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 GBP1P32455 592 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 P2RY2P41231 377 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 TUBP50607 506 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 NDST1P52848 882 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 AP3M2P53677 418 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 HECTD3Q5T447 861 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 RNF43Q68DV7 783 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 GOLGA5Q8TBA6 731 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 SLC2A14Q8TDB8 520 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 MED10Q9BTT4 135 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 ARHGEF4Q9NR80 690 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 OSER1Q9NX31 292 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 MBD1Q9UIS9 605 aaPredicted RBP16.81■□□□□ 0.28
PDGFA-201ENST00000354513 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 WDFY3Q8IZQ1 3526 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 ATP8B3O60423 1300 aa16.81■□□□□ 0.28
PDGFA-201ENST00000354513 MUC22E2RYF6 1773 aaPredicted RBP16.8■□□□□ 0.28
PDGFA-201ENST00000354513 ADH1CP00326 375 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 APODP05090 189 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 PRR29P0C7W0 189 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 PFKFB1P16118 471 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 SV2AQ7L0J3 742 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 CRYBG2Q8N1P7 616 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 C12orf29Q8N999 325 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 CCDC26Q8TAB7 109 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 RLN3Q8WXF3 142 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 P2RY11Q96G91 374 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 APOBEC3GQ9HC16 384 aaKnown RBP16.8■□□□□ 0.28
PDGFA-201ENST00000354513 FAM49BQ9NUQ9 324 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 EXOC1Q9NV70 894 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 TBC1D14Q9P2M4 693 aa16.8■□□□□ 0.28
PDGFA-201ENST00000354513 A0A1B0GVL5 298 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 PDXKO00764 312 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 CDX4O14627 284 aaPredicted RBP16.79■□□□□ 0.28
PDGFA-201ENST00000354513 GIPC1O14908 333 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 TULP3O75386 442 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 HLA-DRAP01903 254 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 IRF1P10914 325 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 GRIA2P42262 883 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 MAP7D1Q3KQU3 841 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 USP39Q53GS9 565 aaKnown RBP16.79■□□□□ 0.28
PDGFA-201ENST00000354513 ATL3Q6DD88 541 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 TMEM25Q86YD3 366 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 MIB1Q86YT6 1006 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 NAT16Q8N8M0 369 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 TMC2Q8TDI7 906 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 OTUB2Q96DC9 234 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 KLF16Q9BXK1 252 aaPredicted RBP16.79■□□□□ 0.28
PDGFA-201ENST00000354513 CD248Q9HCU0 757 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 COMMD8Q9NX08 183 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 ASCC3Q8N3C0 2202 aaKnown RBP16.79■□□□□ 0.28
PDGFA-201ENST00000354513 CKAP5Q14008 2032 aa16.79■□□□□ 0.28
PDGFA-201ENST00000354513 ASPMQ8IZT6 3477 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 C4orf47A7E2U8 309 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 TLR5O60602 858 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 TBX18O95935 607 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 HSP90AA1P07900 732 aaKnown RBP16.78■□□□□ 0.28
PDGFA-201ENST00000354513 TNFRSF4P43489 277 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 MAP3K7CLP57077 242 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 SHC2P98077 582 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 GAD2Q05329 585 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 INCA1Q0VD86 236 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 ST3GAL2Q16842 350 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 HSF5Q4G112 596 aaPredicted RBP16.78■□□□□ 0.28
PDGFA-201ENST00000354513 PSAPL1Q6NUJ1 521 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 CLEC20AQ6ZU45 233 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 CYP2U1Q7Z449 544 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 C11orf74Q86VG3 221 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 TTC30AQ86WT1 665 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 TERB1Q8NA31 727 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 WHAMMQ8TF30 809 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 NMUR1Q9HB89 426 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.78■□□□□ 0.285e-7■■■■■ 285.7
PDGFA-201ENST00000354513 SPHK2Q9NRA0 654 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 ZDHHC9Q9Y397 364 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 SH3BP1Q9Y3L3 701 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
PDGFA-201ENST00000354513 FAM237AA0A1B0GTK4 181 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms