RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 BBOF1Q8ND07 529 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 DENND1AQ8TEH3 1009 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 FBF1Q8TES7 1133 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 PAAF1Q9BRP4 392 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 STARD7Q9NQZ5 370 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 BATF3Q9NR55 127 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 FAM105AQ9NUU6 356 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 TJP2Q9UDY2 1190 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 CYTH4Q9UIA0 394 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 PHTF1Q9UMS5 762 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 STARD13Q9Y3M8 1113 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 MOXD2PA6NHM9 499 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 PSTPIP1O43586 416 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 ABHD2P08910 425 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 ZSCAN5DPP0CG00 497 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 MYBL1P10243 752 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 TBXAS1P24557 533 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 CDK7P50613 346 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 RNASELQ05823 741 aaKnown RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 MAMLD1Q13495 774 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 DSC3Q14574 896 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 PCBP1Q15365 356 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 ATP13A4Q4VNC1 1196 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF667Q5HYK9 610 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 SLC4A11Q8NBS3 891 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 C11orf70Q9BRQ4 267 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 PLEKHA5Q9HAU0 1116 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 SAYSD1Q9NPB0 183 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 KLHL11Q9NVR0 708 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 NKX1-2Q9UD57 310 aaPredicted RBP8.99□□□□□ -0.97
TRIM55-204ENST00000353317 HAO1Q9UJM8 370 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 USTQ9Y2C2 406 aa8.99□□□□□ -0.97
TRIM55-204ENST00000353317 POC1B-GALNT4F8VUJ3 575 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 NEBLO76041 1014 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 KRT10P13645 584 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CYP3A5P20815 502 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 RPA3P35244 121 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 MLH1P40692 756 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CCNG1P51959 295 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 PKN2Q16513 984 aaKnown RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CCDC142Q17RM4 750 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 FAM26DQ5JW98 314 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 C9orf57Q5W0N0 161 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 VSIG1Q86XK7 387 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 KATNAL2Q8IYT4 538 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 C4orf33Q8N1A6 199 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 RIBC1Q8N443 379 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 LINC01599Q8WXQ3 324 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CFAP57Q96MR6 1250 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 LRRC37BQ96QE4 947 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 GAD1Q99259 594 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 MRPL45Q9BRJ2 306 aaKnown RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 TSEN34Q9BSV6 310 aaKnown RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 IMPG2Q9BZV3 1241 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 LRMDAQ9H2I8 198 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 VRTNQ9H8Y1 702 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 TXLNGQ9NUQ3 528 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 ITGA11Q9UKX5 1188 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 DNPEPQ9ULA0 475 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 PHF24Q9UPV7 400 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 M0QZ92 97 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 ARVCFO00192 962 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 PIRO00625 290 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 PRPF4O43172 522 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CILPO75339 1184 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 FGFR1P11362 822 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CCL5P13501 91 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 ETS1P14921 441 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 KCNE1P15382 129 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 TCF4P15884 667 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 GM2AP17900 193 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 SSR1P43307 286 aaKnown RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 NOMO3P69849 1222 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 SETDB1Q15047 1291 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 KYAT1Q16773 422 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 SOWAHAQ2M3V2 549 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 KAZNQ674X7 775 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CAPN12Q6ZSI9 719 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 RSPH3Q86UC2 560 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 ZNF677Q86XU0 584 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 C12orf29Q8N999 325 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 C3orf58Q8NDZ4 430 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 EXD1Q8NHP7 514 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 KCNV2Q8TDN2 545 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 TRIM11Q96F44 468 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 PPP1R10Q96QC0 940 aaKnown RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 RAB3IPQ96QF0 476 aaPredicted RBP8.98□□□□□ -0.97
TRIM55-204ENST00000353317 RNF208Q9H0X6 261 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 TRABDQ9H4I3 376 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 USH1CQ9Y6N9 552 aa8.98□□□□□ -0.97
TRIM55-204ENST00000353317 CCDC189A1A4V9 331 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 F8W810 466 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 PI4K2BG5E9Z4 385 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 DNALI1O14645 258 aaPredicted RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 TLR3O15455 904 aaKnown RBP8.97□□□□□ -0.97
TRIM55-204ENST00000353317 LIASO43766 372 aa8.97□□□□□ -0.97
TRIM55-204ENST00000353317 B4GALT3O60512 393 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms