RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 STAG3L1P0CL83 205 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 YWHAZP63104 245 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 SLC18A2Q05940 514 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 FAM183BPQ6ZVS7 135 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 CXorf38Q8TB03 319 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 DTX3LQ8TDB6 740 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 ALKBH8Q96BT7 664 aaKnown RBP18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 NSL1Q96IY1 281 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 CNTN3Q9P232 1028 aa18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 MARCOQ9UEW3 520 aaPredicted RBP18.84■□□□□ 0.61
PTP4A3-202ENST00000349124 IGKV6-21A0A0C4DH24 114 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 GYG2O15488 501 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 SMNDC1O75940 238 aaKnown RBP eCLIP18.83■□□□□ 0.612e-6■■■■□ 20.7
PTP4A3-202ENST00000349124 TFE3P19532 575 aaPredicted RBP18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 EDNRBP24530 442 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 ZNF143P52747 638 aaPredicted RBP18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 SURF1Q15526 300 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 SMAD1Q15797 465 aaKnown RBP18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 ACSBG2Q5FVE4 666 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 TRMT10BQ6PF06 316 aaKnown RBP18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 CAND1Q86VP6 1230 aaKnown RBP18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 ARMC2Q8NEN0 867 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 SKA1Q96BD8 255 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 LPIN3Q9BQK8 851 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 CXCL16Q9H2A7 254 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 RNPEPQ9H4A4 650 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 RNF19AQ9NV58 838 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 ASNSD1Q9NWL6 643 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 TTLL3Q9Y4R7 772 aa18.83■□□□□ 0.61
PTP4A3-202ENST00000349124 LCTP09848 1927 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 C2CD4BA6NLJ0 364 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 RPS12P25398 132 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 RXRBP28702 533 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 STIP1P31948 543 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 GRIA1P42261 906 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 NDST1P52848 882 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 WASHC2DQ5SRD0 308 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 ANO7Q6IWH7 933 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 PQLC3Q8N755 202 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 ENDOVQ8N8Q3 282 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 RNF157Q96PX1 679 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 TRIM6Q9C030 488 aaPredicted RBP18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 C20orf27Q9GZN8 174 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 NGRNQ9NPE2 291 aaKnown RBP18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 BATF3Q9NR55 127 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 GGA3Q9NZ52 723 aa18.83■□□□□ 0.6
PTP4A3-202ENST00000349124 SOCS7O14512 581 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 CCDC22O60826 627 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 ENDOD1O94919 500 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 PCK1P35558 622 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 CDK16Q00536 496 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 MBTD1Q05BQ5 628 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 BLMHQ13867 455 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 MPP5Q8N3R9 675 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 NETO2Q8NC67 525 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 FRMD8P1Q9BZ68 369 aaPredicted RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 WDR35Q9P2L0 1181 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 ZC3H7BQ9UGR2 993 aaKnown RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 FCHO1O14526 889 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 COPEO14579 308 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 ZBTB7AO95365 584 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 GPD1P21695 349 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 ATXN1P54253 815 aaKnown RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 IRX4P78413 519 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 MRPS5P82675 430 aaKnown RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 KRT81Q14533 505 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 CCDC14Q49A88 953 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 GJC2Q5T442 439 aaPredicted RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 FBXO16Q8IX29 292 aaPredicted RBP18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 PCDH19Q8TAB3 1148 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 ZNF398Q8TD17 642 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 NRG4Q8WWG1 115 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 SPATA33Q96N06 139 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 ACAP3Q96P50 834 aa18.82■□□□□ 0.6
PTP4A3-202ENST00000349124 NDC80O14777 642 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 KIF1CO43896 1103 aaKnown RBP18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 PRPSAP2O60256 369 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 YY1P25490 414 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 GABRB2P47870 512 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 PPP6R3Q5H9R7 873 aaPredicted RBP18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 SLC26A11Q86WA9 606 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 SCUBE3Q8IX30 993 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 UNC5BQ8IZJ1 945 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 CNPY3Q9BT09 278 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 B3GNT5Q9BYG0 378 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 SPATC1LQ9H0A9 340 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 PDGFCQ9NRA1 345 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 PFKMP08237 780 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 TUBP50607 506 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 RCN1Q15293 331 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 SLC10A6Q3KNW5 377 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 MROH9Q5TGP6 573 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 ZNF772Q68DY9 489 aaPredicted RBP18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 TREML1Q86YW5 311 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 VPS52Q8N1B4 723 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 OXNAD1Q96HP4 312 aaPredicted RBP18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 HPDLQ96IR7 371 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 PHACTR1Q9C0D0 580 aa18.81■□□□□ 0.6
PTP4A3-202ENST00000349124 POPDC2Q9HBU9 364 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms