RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 DOLKQ9UPQ8 538 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 PCDHA3Q9Y5H8 950 aa12.49□□□□□ -0.41
COL12A1-202ENST00000345356 SDR42E2A6NKP2 422 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 TP53BP2Q13625 1128 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 KCTD19Q17RG1 926 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 SLC47A2Q86VL8 602 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CENPLQ8N0S6 344 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CLEC4MQ9H2X3 399 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 PIF1Q9H611 641 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 ABCB10Q9NRK6 738 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 SIK3Q9Y2K2 1263 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 F5H6K3 240 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 HUS1O60921 280 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 FAM20BO75063 409 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 TOMM70O94826 608 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 FLT3P36888 993 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CACNB3P54284 484 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 KLRC3Q07444 240 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 LRRC74AQ0VAA2 488 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 PDK1Q15118 436 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 EFL1Q7Z2Z2 1120 aaKnown RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 POC5Q8NA72 575 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 ASAP3Q8TDY4 903 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 TIPINQ9BVW5 301 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CYP4F12Q9HCS2 524 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CHST7Q9NS84 486 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 BTBD3Q9Y2F9 522 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 C2CD2LO14523 706 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 SNPHO15079 494 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 TRMUO75648 421 aaKnown RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 LPCAT4Q643R3 524 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 AAGABQ6PD74 315 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 MAB21L3Q8N8X9 362 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CNKSR1Q969H4 720 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF668Q96K58 619 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 COX4I2Q96KJ9 171 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 FAM193BQ96PV7 902 aaPredicted RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 POP1Q99575 1024 aaKnown RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 RUSC1Q9BVN2 902 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 DNAAF2Q9NVR5 837 aaKnown RBP12.48□□□□□ -0.41
COL12A1-202ENST00000345356 PACSIN3Q9UKS6 424 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 SHROOM2Q13796 1616 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 TIMM44O43615 452 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 CSPG5O95196 566 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 XIAPP98170 497 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 GLRA4Q5JXX5 417 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 BBS7Q8IWZ6 715 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 SVOPQ8N4V2 548 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 ENKURQ8TC29 256 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 PLEKHA5Q9HAU0 1116 aa12.48□□□□□ -0.41
COL12A1-202ENST00000345356 EVPLLA8MZ36 301 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 KBTBD13C9JR72 458 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 EIF2S1P05198 315 aaKnown RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 CCDC166P0CW27 439 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FDFT1P37268 417 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 TRIP4Q15650 581 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 DUPD1Q68J44 220 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 CCNJLQ8IV13 435 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 SEPT12Q8IYM1 358 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 EFCAB3Q8N7B9 438 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 NSUN4Q96CB9 384 aaKnown RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 HES6Q96HZ4 224 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF512BQ96KM6 892 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FBXO6Q9NRD1 293 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 IARS2Q9NSE4 1012 aaKnown RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FAM25AB3EWG3 89 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FAM25CB3EWG5 89 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 FAM25GB3EWG6 89 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 CCNA2P20248 432 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 PDZK1Q5T2W1 519 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 EGFLAMQ63HQ2 1017 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 DCAF15Q66K64 600 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 KLHL17Q6TDP4 642 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ZSWIM2Q8NEG5 633 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 KCTD10Q9H3F6 313 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 VTA1Q9NP79 307 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 SORCS3Q9UPU3 1222 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 GSC2O15499 205 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 RHOBTB1O94844 696 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 MT-CO1P00395 513 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 KRT6BP04259 564 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 KRT6CP48668 564 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 RAB27AP51159 221 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 HSD17B4P51659 736 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 STRA8Q7Z7C7 330 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 STK32CQ86UX6 486 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 OR7A2PQ8NGA2 310 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ACTL9Q8TC94 416 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 MTG1Q9BT17 334 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 DBNDD1Q9H9R9 158 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ZNF302Q9NR11 478 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 CD274Q9NZQ7 290 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 PPEF1O14829 653 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-202ENST00000345356 MAP3K13O43283 966 aa12.47□□□□□ -0.41
COL12A1-202ENST00000345356 ZMPSTE24O75844 475 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms