RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 POTEMA6NI47 508 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 FAM25EA8MYX2 175 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 IGF2BP3O00425 579 aaKnown RBP eCLIP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 PPP1R18Q6NYC8 613 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 POTEHQ6S545 545 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 POTEGQ6S5H5 508 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 CXXC5Q7LFL8 322 aaKnown RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 ENGASEQ8NFI3 743 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 FEM1BQ9UK73 627 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 PRPF3O43395 683 aaKnown RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 TMED8Q6PL24 325 aaPredicted RBP18.16■□□□□ 0.5
SMAD4-201ENST00000342988 S100ZQ8WXG8 99 aa18.16■□□□□ 0.5
SMAD4-201ENST00000342988 CACNB1Q02641 598 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 VAC14Q08AM6 782 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 ZBTB49Q6ZSB9 765 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 FAM228AQ86W67 206 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 MAGEE2Q8TD90 523 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 ADGRE3Q9BY15 652 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 RSAD1Q9HA92 442 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 TGM2P21980 687 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 QPRTQ15274 297 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 CCNG2Q16589 344 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 SKA1Q96BD8 255 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 KATNAL1Q9BW62 490 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 ELL3Q9HB65 397 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 MIIPQ5JXC2 388 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 MTSS1LQ765P7 747 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 MIER2Q8N344 545 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 PNPLA8Q9NP80 782 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 ARHGAP28Q9P2N2 729 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 TIPRLO75663 272 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 CDH18Q13634 790 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 OCLNQ16625 522 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 GSDMCQ9BYG8 508 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 TRIM3O75382 744 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 NFKB1P19838 968 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 B3GALNT2Q8NCR0 500 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 SLITRK1Q96PX8 696 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 KIAA0586Q9BVV6 1533 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 ATP2C1P98194 919 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 TMEM132DQ14C87 1099 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 DENND1BQ6P3S1 775 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 AAR2Q9Y312 384 aaKnown RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 LAMC1P11047 1609 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 DENND4BO75064 1496 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 PSMC5P62195 406 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 USF2Q15853 346 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 GALNT18Q6P9A2 607 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
SMAD4-201ENST00000342988 R3HCC1LQ7Z5L2 792 aaKnown RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 NMD3Q96D46 503 aaKnown RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 PPP1R10Q96QC0 940 aaKnown RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 FRMD8P1Q9BZ68 369 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.15■□□□□ 0.5
SMAD4-201ENST00000342988 ERVV-2B6SEH9 535 aa18.14■□□□□ 0.5
SMAD4-201ENST00000342988 HAT1O14929 419 aa18.14■□□□□ 0.5
SMAD4-201ENST00000342988 CLK3P49761 638 aaKnown RBP18.14■□□□□ 0.5
SMAD4-201ENST00000342988 AMPD2Q01433 879 aa18.14■□□□□ 0.5
SMAD4-201ENST00000342988 TMEM63BQ5T3F8 832 aa18.14■□□□□ 0.5
SMAD4-201ENST00000342988 OLFML1Q6UWY5 402 aa18.14■□□□□ 0.5
SMAD4-201ENST00000342988 MYO1HQ8N1T3 1032 aa18.14■□□□□ 0.5
SMAD4-201ENST00000342988 GNB5O14775 395 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 AHCYL1O43865 530 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 TCEA3O75764 348 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 OR7A10O76100 309 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 COPZ1P61923 177 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 ABATP80404 500 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 SPIRE1Q08AE8 756 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 R3HDM1Q15032 1099 aaKnown RBP18.14■□□□□ 0.49
SMAD4-201ENST00000342988 PCSK1P29120 753 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 CAV3P56539 151 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 RASGEF1AQ8N9B8 481 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 TPD52L3Q96J77 140 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 C9orf16Q9BUW7 83 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 ZNF341Q9BYN7 854 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 CLPBQ9H078 707 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 WRBO00258 174 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 ACADMP11310 421 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 NPR2P20594 1047 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 CHN2P52757 468 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 PDCD4Q53EL6 469 aaKnown RBP18.14■□□□□ 0.49
SMAD4-201ENST00000342988 ERO1BQ86YB8 467 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 AAASQ9NRG9 546 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 PCDHGB3Q9Y5G1 929 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 CHRNGP07510 517 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 TTKP33981 857 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 LIN7AO14910 233 aaPredicted RBP18.14■□□□□ 0.49
SMAD4-201ENST00000342988 OMPP47874 163 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 AP3S2P59780 193 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 ERICH5Q6P6B1 374 aa18.14■□□□□ 0.49
SMAD4-201ENST00000342988 TRIM66O15016 1216 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 UMPSP11172 480 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 PIGOQ8TEQ8 1089 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 OSBPL11Q9BXB4 747 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 LRRC4BQ9NT99 713 aa18.13■□□□□ 0.49
SMAD4-201ENST00000342988 ATP5F1P24539 256 aaPredicted RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 TARSP26639 723 aaKnown RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 CDK5RAP1Q96SZ6 601 aaKnown RBP18.13■□□□□ 0.49
SMAD4-201ENST00000342988 RPS6KA6Q9UK32 745 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms