RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 PPP1R36Q96LQ0 422 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 TEPSINQ96N21 525 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 KCNK13Q9HB14 408 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 SEPT10Q9P0V9 454 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 PACSIN3Q9UKS6 424 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 LRRC42Q9Y546 428 aa14.98□□□□□ -0.01
CPSF7-201ENST00000340437 CCDC189A1A4V9 331 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 APOC4-APOC2K7ER74 178 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 MAP3K7O43318 606 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 APOC2P02655 101 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 GNAT1P11488 350 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 ASPAP45381 313 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 RTP1P59025 263 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 POLNQ7Z5Q5 900 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 XYLT1Q86Y38 959 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 TREML1Q86YW5 311 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 SHKBP1Q8TBC3 707 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 CPB2Q96IY4 423 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 SDCBP2Q9H190 292 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 ACSS2Q9NR19 701 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 MAP3K20Q9NYL2 800 aaKnown RBP14.97□□□□□ -0.01
CPSF7-201ENST00000340437 CIB2O75838 187 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 TRUB2O95900 331 aaKnown RBP14.97□□□□□ -0.01
CPSF7-201ENST00000340437 SKIP12755 728 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 KCNA3P22001 575 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 ZNF132P52740 706 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 PPP2R5DQ14738 602 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 AMHR2Q16671 573 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 EBF4Q9BQW3 602 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 CYLDQ9NQC7 956 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 SAR1AQ9NR31 198 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 ASNSD1Q9NWL6 643 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 MED7O43513 233 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 TAP1Q03518 808 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 PEX6Q13608 980 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 ATF7IP2Q5U623 682 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 GADL1Q6ZQY3 521 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 SCUBE3Q8IX30 993 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 MPP5Q8N3R9 675 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 DEPDC1BQ8WUY9 529 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 PGLYRP2Q96PD5 576 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 ACO2Q99798 780 aaKnown RBP14.97□□□□□ -0.01
CPSF7-201ENST00000340437 LPIN3Q9BQK8 851 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 STYXL1Q9Y6J8 313 aa14.97□□□□□ -0.01
CPSF7-201ENST00000340437 DLDP09622 509 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 PTPRAP18433 802 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 OSBPP22059 807 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 KCNA4P22459 653 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 SESN2P58004 480 aaPredicted RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 RPL10AP62906 217 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 ZRSR2Q15696 482 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 C6orf163Q5TEZ5 329 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 CES3Q6UWW8 571 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 RGS9BPQ6ZS82 235 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 SLC26A11Q86WA9 606 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 RBM15BQ8NDT2 890 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 AGBL3Q8NEM8 1001 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 COPS5Q92905 334 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 ALKBH8Q96BT7 664 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 PCYT2Q99447 389 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 ELOVL4Q9GZR5 314 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 MAFBQ9Y5Q3 323 aaPredicted RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 COL11A2P13942 1736 aaPredicted RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 RBBP6Q7Z6E9 1792 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 TCRBV5S1A1TA0A578 114 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 MSCO60682 206 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 SNRPAP09012 282 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 ATXN1P54253 815 aaKnown RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 PTPN11Q06124 597 aaPredicted RBP14.96□□□□□ -0.01
CPSF7-201ENST00000340437 SLC34A1Q06495 639 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 PPP1R15BQ5SWA1 713 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 SLC44A1Q8WWI5 657 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 SCOCQ9UIL1 159 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 KCNG1Q9UIX4 513 aa14.96□□□□□ -0.01
CPSF7-201ENST00000340437 PRR5-ARHGAP8B1AHC4 643 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 PHKA2P46019 1235 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 ARHGAP8P85298 464 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 SLC25A3Q00325 362 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 PRKD1Q15139 912 aaPredicted RBP14.96□□□□□ -0.02
CPSF7-201ENST00000340437 CA9Q16790 459 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 HSDL1Q3SXM5 330 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 TTC39BQ5VTQ0 682 aaPredicted RBP14.96□□□□□ -0.02
CPSF7-201ENST00000340437 CRLF3Q8IUI8 442 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 ZNF276Q8N554 614 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 VCXQ9H320 206 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 R3HDMLQ9H3Y0 253 aa14.96□□□□□ -0.02
CPSF7-201ENST00000340437 DHX35Q9H5Z1 703 aaKnown RBP14.96□□□□□ -0.02
CPSF7-201ENST00000340437 TXNDC9O14530 226 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 ZMPSTE24O75844 475 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 NCF2P19878 526 aaPredicted RBP14.95□□□□□ -0.02
CPSF7-201ENST00000340437 NEK3P51956 506 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 CFAP157Q5JU67 520 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 PTCD3Q96EY7 689 aaKnown RBP14.95□□□□□ -0.02
CPSF7-201ENST00000340437 B3GNT5Q9BYG0 378 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 RSAD1Q9HA92 442 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 AS3MTQ9HBK9 375 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 ADGRA2Q96PE1 1338 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 LACTBL1A8MY62 500 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 SPECC1L-ADORA2AF8WAN1 911 aa14.95□□□□□ -0.02
CPSF7-201ENST00000340437 LMNAP02545 664 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms