RNA–Protein interactions for RNA: ENST00000339598.7

OTOF-203, Transcript of otoferlin, humanhuman

TSL 1 (best) BASIC

Gene OTOF, Length 4,756 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-203ENST00000339598 RXFP1Q9HBX9 757 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 AGO4Q9HCK5 861 aaKnown RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 UBP1Q9NZI7 540 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 NCKIPSDQ9NZQ3 722 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 A0A087WZ62 844 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 MT-CO1P00395 513 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 PECAM1P16284 738 aaPredicted RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 PTPN4P29074 926 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 PPATQ06203 517 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 MEA1Q16626 185 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 TTLL9Q3SXZ7 439 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 HORMAD1Q86X24 394 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 GTF3C2Q8WUA4 911 aaPredicted RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 FDXACB1Q9BRP7 624 aaPredicted RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 CYP3A43Q9HB55 503 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 USP20Q9Y2K6 914 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 CYTH3O43739 400 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 KRT8P05787 483 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 SHMT1P34896 483 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 FAR2Q96K12 515 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 CINPQ9BW66 212 aaPredicted RBP12.89□□□□□ -0.35
OTOF-203ENST00000339598 DCLK3Q9C098 648 aa12.89□□□□□ -0.35
OTOF-203ENST00000339598 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ZNF23P17027 643 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 HSPA13P48723 471 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 NME5P56597 212 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 MGAT5Q09328 741 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 MFSD7Q6UXD7 560 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 CCDC81Q6ZN84 652 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 CCDC60Q8IWA6 550 aaPredicted RBP12.88□□□□□ -0.35
OTOF-203ENST00000339598 TBC1D19Q8N5T2 526 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
OTOF-203ENST00000339598 PXMP2Q9NR77 195 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.88□□□□□ -0.35
OTOF-203ENST00000339598 C2orf81A6NN90 581 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 TM9SF1O15321 606 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 CETPP11597 493 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ODC1P11926 461 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ZNF177Q13360 481 aaPredicted RBP12.88□□□□□ -0.35
OTOF-203ENST00000339598 IYDQ6PHW0 289 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 OTOP1Q7RTM1 612 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ARHGEF19Q8IW93 802 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 FBXO16Q8IX29 292 aaPredicted RBP12.88□□□□□ -0.35
OTOF-203ENST00000339598 TCP10LQ8TDR4 215 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ZNF333Q96JL9 665 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 SPON1Q9HCB6 807 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 HPS4Q9NQG7 708 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 RAP1GDS1P52306 607 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 GLT1D1Q96MS3 346 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 TAGLN3Q9UI15 199 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 CEP170BQ9Y4F5 1589 aaPredicted RBP12.88□□□□□ -0.35
OTOF-203ENST00000339598 TMEM150BA6NC51 233 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 VWA5AO00534 786 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 ALDH1A3P47895 512 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 SLC11A2P49281 568 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 GCNT1Q02742 428 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 CHRNB3Q05901 458 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 BBS7Q8IWZ6 715 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 COLGALT1Q8NBJ5 622 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 SALL1Q9NSC2 1324 aa12.88□□□□□ -0.35
OTOF-203ENST00000339598 DNALI1O14645 258 aaPredicted RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 VPS26AO75436 327 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 CNTFP26441 200 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 HUNKP57058 714 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 CDH18Q13634 790 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 ITGA9Q13797 1035 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 R3HDM1Q15032 1099 aaKnown RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 TMEM119Q4V9L6 283 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 SAMD3Q8N6K7 520 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.87□□□□□ -0.35
OTOF-203ENST00000339598 TSEN2Q8NCE0 465 aaKnown RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 AENQ8WTP8 325 aaKnown RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 HES6Q96HZ4 224 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 GPAMQ9HCL2 828 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 IMPAD1Q9NX62 359 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 RNF112Q9ULX5 631 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 PCDHA3Q9Y5H8 950 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 NCF1BA6NI72 391 aaPredicted RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 NCF1CA8MVU1 366 aaPredicted RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 C2CD2LO14523 706 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 USP1O94782 785 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 NCF1P14598 390 aaPredicted RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 CSHL1Q14406 222 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 CRYMQ14894 314 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 ACBD5Q5T8D3 534 aaPredicted RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 TDRD10Q5VZ19 366 aaKnown RBP12.87□□□□□ -0.35
OTOF-203ENST00000339598 SH3RF1Q7Z6J0 888 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 ADGRF2Q8IZF7 708 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 CEP41Q9BYV8 373 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 ITM2BQ9Y287 266 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 LMTK2Q8IWU2 1503 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 AK9Q5TCS8 1911 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 E7ENQ6 273 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 EML1O00423 815 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 PSMC3P17980 439 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 THPOP40225 353 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 CPT1AP50416 773 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 C3orf67Q6ZVT6 689 aa12.87□□□□□ -0.35
OTOF-203ENST00000339598 CPB2Q96IY4 423 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms