RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ARHGEF4Q9NR80 690 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 TLR8Q9NR97 1041 aaKnown RBP11.29□□□□□ -0.6
CAPN3-202ENST00000337571 VPS45Q9NRW7 570 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 KRT82Q9NSB4 513 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 CACNA1AO00555 2505 aa11.29□□□□□ -0.6
CAPN3-202ENST00000337571 MYO16Q9Y6X6 1858 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 MAPK13O15264 365 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-202ENST00000337571 COCHO43405 550 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 KAT7O95251 611 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 VNN1O95497 513 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 CYP17A1P05093 508 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 ADH5P11766 374 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 NR2F2P24468 414 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 MPLP40238 635 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 GRIA2P42262 883 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 TNFRSF4P43489 277 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 SLC6A11P48066 632 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 TUBP50607 506 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 NDST1P52848 882 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 SLC5A3P53794 718 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 MAP3K7CLP57077 242 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 ANO4Q32M45 955 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 PLK5Q496M5 336 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 HSF5Q4G112 596 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-202ENST00000337571 EOGTQ5NDL2 527 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 SNX30Q5VWJ9 437 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 ANO7Q6IWH7 933 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 RHBDF2Q6PJF5 856 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 PAQR9Q6ZVX9 377 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 INTS8Q75QN2 995 aaKnown RBP11.28□□□□□ -0.6
CAPN3-202ENST00000337571 FUKQ8N0W3 1084 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 PGBD3Q8N328 593 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 ELMO3Q96BJ8 720 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 SDCBP2Q9H190 292 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-202ENST00000337571 CCSER2Q9H7U1 834 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 TMEM30AQ9NV96 361 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 MMP17Q9ULZ9 603 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 TRAF3IP3Q9Y228 551 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 INVSQ9Y283 1065 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 EML5Q05BV3 1969 aa11.28□□□□□ -0.6
CAPN3-202ENST00000337571 GPR179Q6PRD1 2367 aa11.27□□□□□ -0.6
CAPN3-202ENST00000337571 SPAG17Q6Q759 2223 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 TBC1D3BA6NDS4 549 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 TNFRSF10BO14763 440 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 DCLK1O15075 740 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CAVIN2O95810 425 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 ASS1P00966 412 aaKnown RBP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 HLA-DRAP01903 254 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 FAM200BP0CF97 657 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CCDC130P13994 396 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 ADORA2BP29275 332 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 PSMC2P35998 433 aaKnown RBP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 ATP5C1P36542 298 aaKnown RBP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 NDUFA8P51970 172 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 LIMK1P53667 647 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 ORC1Q13415 861 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 ADAM9Q13443 819 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 BYSLQ13895 437 aaKnown RBP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 DSG2Q14126 1118 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CRY1Q16526 586 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 LY6G5CQ5SRR4 150 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 FAM186BQ8IYM0 893 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 ALLCQ8N6M5 410 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 NAT16Q8N8M0 369 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 C12orf29Q8N999 325 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CYFIP2Q96F07 1278 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 NT5C1AQ9BXI3 368 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 TPSD1Q9BZJ3 242 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 MMRN2Q9H8L6 949 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CYP3A43Q9HB55 503 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CSNK1G1Q9HCP0 422 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 FAM49BQ9NUQ9 324 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 IL37Q9NZH6 218 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 GMIPQ9P107 970 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 BCCIPQ9P287 314 aaKnown RBP eCLIP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 DEC1Q9P2X7 70 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 LSM7Q9UK45 103 aaKnown RBP11.27□□□□□ -0.61
CAPN3-202ENST00000337571 MAPK8IP1Q9UQF2 711 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 HPSEQ9Y251 543 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 KIAA1549LQ6ZVL6 1849 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 CEP250Q9BV73 2442 aa11.27□□□□□ -0.61
CAPN3-202ENST00000337571 A0A0A0MRY4 1105 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 STX10O60499 249 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 TLR5O60602 858 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 RHOBTB3O94955 611 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 KLF8O95600 359 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-202ENST00000337571 ADRB1P08588 477 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 ZDHHC11BP0C7U3 371 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 IRF1P10914 325 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 GCLMP48507 274 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 FOXK1P85037 733 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 KDSRQ06136 332 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 PLA2G2CQ5R387 149 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 STPG1Q5TH74 334 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 RNF43Q68DV7 783 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 SPOPLQ6IQ16 392 aa11.26□□□□□ -0.61
CAPN3-202ENST00000337571 SDE2Q6IQ49 451 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms