RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 AK5Q9Y6K8 562 aa6.37□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF879B4DU55 563 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CYP21A2P08686 494 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PABPC1P11940 636 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 GPR1P46091 355 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 BST2Q10589 180 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 USF2Q15853 346 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF589Q86UQ0 364 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TRPV1Q8NER1 839 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PLEKHG4BQ96PX9 1271 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 EPB41L4BQ9H329 900 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TEX46H3BTG2 121 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ATP9BO43861 1147 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 GUCY1A2P33402 732 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RPS8P62241 208 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SLC15A2Q16348 729 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PYDC2Q56P42 97 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SGO1Q5FBB7 561 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 DENND1BQ6P3S1 775 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 C8orf59Q8N0T1 100 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 C9orf72Q96LT7 481 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PPP1R10Q96QC0 940 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 GSAPA4D1B5 854 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 FAM47E-STBD1D6RA91 191 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 KPNA6O60684 536 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 KHDRBS3O75525 346 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 BMP10O95393 424 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 POU1F1P28069 291 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SFNP31947 248 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 MAPK7Q13164 816 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 DUOXA2Q1HG44 320 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RC3H1Q5TC82 1133 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 NYAP1Q6ZVC0 841 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PSMA8Q8TAA3 256 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ZC3H10Q96K80 434 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SAR1AQ9NR31 198 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 MOSPD1Q9UJG1 213 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ZNF221Q9UK13 617 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CAMSAP1Q5T5Y3 1602 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 DARSP14868 501 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ATF4P18848 351 aaPredicted RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RPL5P46777 297 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 AQP5P55064 265 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ARPP19P56211 112 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CDH18Q13634 790 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TTLL9Q3SXZ7 439 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 KCNB2Q92953 911 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 MCEEQ96PE7 176 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 EYA1Q99502 592 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 MTIF3Q9H2K0 278 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 KCNF1Q9H3M0 494 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ABCB10Q9NRK6 738 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RNF112Q9ULX5 631 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 BCLAF3A2AJT9 711 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SDR42E2A6NKP2 422 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 NFICP08651 508 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 NPR2P20594 1047 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 KCTD1Q719H9 257 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ADCK2Q7Z695 626 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 FAM160B2Q86V87 743 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 PACS2Q86VP3 889 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CATSPERBQ9H7T0 1116 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SRP68Q9UHB9 627 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TELO2Q9Y4R8 837 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SERPIND1P05546 499 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RBP1P09455 135 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 HOXB6P17509 224 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 SMAD1Q15797 465 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 DGKDQ16760 1214 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 OLFML2AQ68BL7 652 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ARHGAP27Q6ZUM4 889 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 VN1R5Q7Z5H4 357 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 POLNQ7Z5Q5 900 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 LRRC71Q8N4P6 559 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 FICDQ9BVA6 458 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ANKRD6Q9Y2G4 727 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 EMSYQ7Z589 1322 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 CHD1O14646 1710 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 C15orf38-AP3S2A0A0A6YYH1 394 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 POTEMA6NI47 508 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 HS6ST1O60243 411 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RBM20Q5T481 1227 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 POTEHQ6S545 545 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 POTEGQ6S5H5 508 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 NUDT18Q6ZVK8 323 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ARPINQ7Z6K5 226 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 ADHFE1Q8IWW8 467 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 EPS8L3Q8TE67 593 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TIPINQ9BVW5 301 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 MRPL4Q9BYD3 311 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 GSDMCQ9BYG8 508 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 RACGAP1Q9H0H5 632 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 DMTF1Q9Y222 760 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 TMEM114B3SHH9 223 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 MGRN1O60291 552 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 P4HBP07237 508 aaKnown RBP6.36□□□□□ -1.39
CSMD1-201ENST00000335551 IL13P35225 146 aa6.36□□□□□ -1.39
CSMD1-201ENST00000335551 BCAMP50895 628 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms