RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 BHMTQ93088 406 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 SDCCAG3Q96C92 435 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 STAMBPL1Q96FJ0 436 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 C9orf72Q96LT7 481 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 TEPSINQ96N21 525 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 CAPN6Q9Y6Q1 641 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 KIF3CO14782 793 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 RAMP2O60895 175 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 PMPCBO75439 489 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 TGM2P21980 687 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 CALRP27797 417 aaKnown RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ATP5C1P36542 298 aaKnown RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 MARSP56192 900 aaKnown RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 PPP2R2AP63151 447 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 OTUD4Q01804 1114 aaKnown RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 MEA1Q16626 185 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 PTRHD1Q6GMV3 140 aaKnown RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 RIBC1Q8N443 379 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ANKRD52Q8NB46 1076 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 SPPL2BQ8TCT7 592 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ACTRT1Q8TDG2 376 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 RSPH1Q8WYR4 309 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 MAML1Q92585 1016 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ZNF669Q96BR6 464 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 BTBD6Q96KE9 485 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 OXCT2Q9BYC2 517 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ULBP1Q9BZM6 244 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 OSGEPQ9NPF4 335 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 GTSE1Q9NYZ3 720 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 HACD3Q9P035 362 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 APOBEC2Q9Y235 224 aaKnown RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 DDX3XO00571 662 aaKnown RBP eCLIP11.63□□□□□ -0.558e-16■■■■■ 29.2
POLR1B-202ENST00000333990 WNT7AO00755 349 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 RAD51CO43502 376 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 DCTN3O75935 186 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 AGTP01019 485 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 MAGEA4P43358 317 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 OLFML2BQ68BL8 750 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 MRNIPQ6NTE8 343 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 SLC25A41Q8N5S1 370 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ISCUQ9H1K1 167 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 SMYD3Q9H7B4 428 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 PSMC3IPQ9P2W1 217 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 TLL1O43897 1013 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 GJB1P08034 283 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 RHOAP61586 193 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 VSNL1P62760 191 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 DLG4P78352 724 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 PDCLQ13371 301 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ECM1Q16610 540 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 FAM71AQ8IYT1 594 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ROPN1BQ9BZX4 212 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 CIPCQ9C0C6 399 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 ROPN1Q9HAT0 212 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 LATS2Q9NRM7 1088 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 C20orf96Q9NUD7 363 aaPredicted RBP11.63□□□□□ -0.55
POLR1B-202ENST00000333990 TXLNGQ9NUQ3 528 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 SPG21Q9NZD8 308 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 CRLS1Q9UJA2 301 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 TRIM33Q9UPN9 1127 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 DOLKQ9UPQ8 538 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 CHMP2BQ9UQN3 213 aa11.63□□□□□ -0.55
POLR1B-202ENST00000333990 TMEM247A6NEH6 219 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ZNF862O60290 1169 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 MYO1DO94832 1006 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 GFAPP14136 432 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 TNFSF9P41273 254 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ITGA8P53708 1063 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 HDAC4P56524 1084 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 STARD3Q14849 445 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 TRADDQ15628 312 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 PSMD5Q16401 504 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 TTLL9Q3SXZ7 439 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 CCNI2Q6ZMN8 369 aaPredicted RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 SCUBE3Q8IX30 993 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 GSPT2Q8IYD1 628 aaKnown RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 CDC26Q8NHZ8 85 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ATP6V1G3Q96LB4 118 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 EFHD1Q9BUP0 239 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 MARCH2Q9P0N8 246 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 STK38LQ9Y2H1 464 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 E5RJQ4 531 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 YBX3P16989 372 aaKnown RBP eCLIP11.62□□□□□ -0.553e-6■■■□□ 15
POLR1B-202ENST00000333990 NCF2P19878 526 aaPredicted RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 POU5F1Q01860 360 aaKnown RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ART3Q13508 389 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 USP10Q14694 798 aaKnown RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 MTFR1Q15390 333 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 TBCCQ15814 346 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 ACBD5Q5T8D3 534 aaPredicted RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 MARC1Q5VT66 337 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 PAPD7Q5XG87 772 aaKnown RBP11.62□□□□□ -0.55
POLR1B-202ENST00000333990 NYAP1Q6ZVC0 841 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 RASAL3Q86YV0 1011 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 HOMEZQ8IX15 550 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 WNT8BQ93098 351 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 SLC13A1Q9BZW2 595 aa11.62□□□□□ -0.55
POLR1B-202ENST00000333990 NXF3Q9H4D5 531 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms